Solitalea canadensis: Solca_1217
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Entry
Solca_1217 CDS
T02084
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
scn
Solitalea canadensis
Pathway
scn00900
Terpenoid backbone biosynthesis
scn01100
Metabolic pathways
scn01110
Biosynthesis of secondary metabolites
Module
scn_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Solca_1217
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scn01006
]
Solca_1217
Enzymes [BR:
scn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Solca_1217
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Solca_1217
2.5.1.29 geranylgeranyl diphosphate synthase
Solca_1217
Prenyltransferases [BR:
scn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Solca_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFD06316
UniProt:
H8KVD6
LinkDB
All DBs
Position
1460225..1461199
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AA seq
324 aa
AA seq
DB search
MLSIKQLQEIITNEIDQLQLPEYPAELYEPIRYLLNLGGKRMRPVLTLMGCNLFSDGIQG
AIKPALAVEVFHNFTLVHDDIMDNAPIRRGKATVHEKWDANSAILSGDVMMVNAYELLMQ
VPDSKLRDLLTIFNKTAIEVCEGQQIDMNFESREYVGVNEYLEMIGLKTAVLLGCSLQIG
ALIGNATTEEAEHLYQFGKNLGIAFQLQDDILDVFGEPEKFGKMVGGDIIANKKTFLLIK
AHELAQGENKANLERWLTTKVFKTEDKVKAVTEIYDQLNIRKLAEIEMQHFAEKALFHIN
QISLSESRKQPLVEFAEQLMVREH
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttatctataaaacaattacaggaaataattaccaacgagattgatcagttacaactg
ccggagtatcctgcagaattgtatgagccaatccgttatttattgaatttaggtggaaaa
agaatgcgtccggtgcttacccttatgggctgtaatcttttttctgatggtattcagggt
gcaataaaaccagctctggcagttgaggtatttcacaactttacattggtgcacgacgat
attatggataatgcaccaatccgtagagggaaagctactgtccatgaaaaatgggatgca
aacagcgcgatcctttccggcgatgtaatgatggtgaatgcttatgagttattaatgcaa
gttcctgactcaaaattgcgtgatttgttaacgatctttaataaaactgcgattgaagtt
tgtgaaggtcagcaaattgacatgaattttgaaagtcgtgagtatgtaggcgttaatgaa
tacctggaaatgatcgggcttaaaacagccgttttattagggtgttcattgcaaatcggt
gcattaataggtaatgcaacaacggaagaggctgaacatttataccaatttggtaaaaac
ttaggtattgcatttcagttacaggatgatattttagatgtattcggtgaacctgagaag
tttggaaaaatggtaggaggtgatattattgccaataagaaaactttcttgctgattaaa
gcacatgaattggctcagggagaaaataaagcaaatcttgaaaggtggctaactacaaaa
gtgtttaaaactgaggataaggtgaaggcagttactgaaatttatgaccaattaaatatt
cggaagctggctgaaattgaaatgcagcattttgcagaaaaagccctgtttcatattaac
cagatttctctaagtgaatcacgtaagcaacctttggtagagtttgcagaacaattaatg
gttcgtgaacactaa
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