Siccibacter colletis: KFZ77_03940
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Entry
KFZ77_03940 CDS
T08544
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
scol
Siccibacter colletis
Pathway
scol00310
Lysine degradation
scol01100
Metabolic pathways
scol01110
Biosynthesis of secondary metabolites
scol01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
KFZ77_03940
Enzymes [BR:
scol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
KFZ77_03940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UYU32684
LinkDB
All DBs
Position
813325..815463
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AA seq
712 aa
AA seq
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MNTIAIMGPHGAFYKDEPIRELQQALIQQGFQPVWPDNSNDLLKLIEHNPRVCGVIFDWD
EYSLDLCCEINQLNEYLPLYAFINTHSTMDVTANEMRMALWFFEYGLGQAEDIAARIRQY
TNEYHDNITPPLTKALFTYVNEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIIGMYAAPAGSTLLV
DRNCHKSLTHLLMMSDIVPIWMKPTRNALGILGGIPRQEFLRATIEQKVAATHGASWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYNGKSGMSGERVPGKVFY
ETQSTHKMLAALSQASLIHIKGDYDEETFNEAYMMHTTTSPSYPLVASIETAAAMLRGNP
GRRLINRSVERALHFRKEVQRLREESDGWFFDIWQPEDVEEADCWPIEPGRAWHGFNNAD
GDHMFLDPVKVTILTPGMNQQGEMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMSLLRGLTEFKRAWDLNLRVKNMLPDLYAEDPDFYRNMRIQTLGQGIHDLIRQH
KLPELMLRAFDTLPEMKMTPHQAYQQQVKGNVETVEIDGLLNRVSANMILPYPPGVPLVM
PGEMITERSRAVLDFMLMLCSIGRHYPGFETDIHGARLGEDGVYRVRVLKQA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccattgccatcatgggcccgcacggggcgttttataaagatgaacccatcagg
gagctgcagcaggcgctcattcagcagggatttcagccggtctggccggacaacagcaac
gatctgctgaagcttattgagcacaacccgcgcgtctgcggcgtgatctttgactgggac
gaatacagcctcgatctgtgctgcgagatcaaccagctcaacgagtacctgccgctgtat
gccttcattaatacccactcgacgatggacgttaccgccaacgagatgcgcatggcgctg
tggttctttgaatacgggctgggccaggcggaagatatcgccgcgcgcatccggcagtac
accaatgagtatcacgacaacatcacgccgccgctgaccaaagcgctattcacctatgtg
aacgaggggaaatataccttctgcacgccggggcatatggccggtaccgcttaccagaaa
agcccggtcggctgtctgttttacgattttttcggcggcaataccctgaaagcggacgtc
tcgatctcggtaaccgagctgggatcgctgctcgatcacaccgggccgcatctggaggcc
gaagagtatatcgcccgcaccttcggggccgagcagagctacatggtgaccaacggcacc
tccacctcgaataaaatcatcggcatgtatgccgctcctgcgggcagcacgctgctggtg
gatcgcaactgccataagtcgctgacgcatctgctgatgatgagcgacatcgtcccgatc
tggatgaaacccacccgcaatgcgctgggcattctcggtggcattccgcggcaggagttc
ctgcgcgccaccatcgagcagaaagtggcggccacccacggcgcgagctggccagtgcac
gccgtaatcaccaactccacttatgacgggctgctgtataacaccaactggatcaagcag
accctcgacgtgccgtcgatccacttcgactccgcctgggtgccctatacccattttcac
ccgatctacaacggcaaaagcggcatgagtggcgagcgggtgccgggcaaagtgttctac
gaaacccagtccacccataaaatgctggctgcgctctcccaggcatcgctgatccacatc
aaaggggattacgacgaagagaccttcaacgaagcgtacatgatgcacaccactacctcg
ccgagctatccgctggtggcctccatcgaaaccgcggcggcgatgctgcgcggcaacccc
ggacggcggctgatcaaccgctccgtcgaacgcgcgctccattttcgtaaagaagtgcag
cgtcttcgcgaagaatctgatggatggtttttcgatatctggcaacctgaggatgtcgag
gaagccgactgctggcccattgaaccgggacgggcgtggcacggcttcaacaatgccgat
ggcgaccatatgttcctcgacccggttaaggtcacgatcctgacgccgggaatgaaccag
cagggcgagatgagcgaagaggggatcccggcggcgctggtggcgaaattcctcgacgag
cgcggggtggtggtggaaaagaccggcccctacaatttgctgtttctgttcagcatcggc
attgataagacccgggcgatgagcctgctgcgcgggctgacggagttcaaacgcgcctgg
gatctcaatctgcgggtgaaaaacatgctgccggatctctacgcagaagatccggatttc
tatcgcaatatgcgcatccagacgctggggcagggcattcacgatctgatccgccagcac
aagctgccggaactgatgctgcgggcgttcgacactctgccggagatgaaaatgacgccg
catcaggcgtaccagcagcaggtaaagggtaacgttgaaaccgtggaaattgacggcctg
ctgaaccgggtgtcggccaacatgatcctgccgtatccgccgggcgtgccgctggtgatg
ccgggggagatgatcaccgagcggagccgggccgtcctcgattttatgctgatgctgtgc
tctattggccgtcactatcccggtttcgaaacggatattcacggcgccagactcggggaa
gacggcgtgtaccgggtcagggtgttaaaacaggcttaa
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