Shewanella cyperi: JYB88_01950
Help
Entry
JYB88_01950 CDS
T07829
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00130
Ubiquinone and other terpenoid-quinone biosynthesis
scyp01100
Metabolic pathways
scyp01110
Biosynthesis of secondary metabolites
scyp01240
Biosynthesis of cofactors
Module
scyp_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
JYB88_01950 (ubiD)
Enzymes [BR:
scyp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
JYB88_01950 (ubiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
QSX30445
UniProt:
A0A974XL69
LinkDB
All DBs
Position
complement(441243..442724)
Genome browser
AA seq
493 aa
AA seq
DB search
MSFKDLRSFIAHLEANGELKRVSYPVDPHLEMTEICDRVLRAGGPALLFEQPKGHSMPVL
ANLFGTPKRVAMALGKEDPLALREVGELLAFLKEPEPPRGFKDALSKLPLFKQALNMPAK
TVSKAPCQEVILTGDEVDLTKLPIQHCWPGDVAPLMTWGLTITKGPRQKRQNLGIYRQQL
LGKNKLIMRWLSHRGGALDFKDFQEQHPGENYPVVVALGSDPVTILGAVTPVPDSMSEYA
FAGLLRGERTEVVKALSCDLEVPATSEIILEGYIAPGEMAEEGPYGDHTGYYNETDSFPV
FTVTHISHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSY
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWQDVIWAITTRMDP
IRDTLMVDNTPIDYLDFASPVAGLGSKMGLDATNKWPGETQREWGTPIVMDPQVKQKVDE
IWDQLGIDDSPTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcagcttcatcgcgcacctggaagcgaacggtgagttgaag
cgcgtcagctatccggtggatcctcatctcgaaatgaccgagatttgcgaccgggtgctg
cgtgcaggcggcccggcgctgctgtttgaacagcccaagggccacagtatgcctgtgttg
gccaacctgttcggcacccccaaacgggtcgccatggccctgggcaaggaagatccgctg
gcgctaagggaagtgggtgagctgctggcctttttgaaagagcccgagccgccacggggc
ttcaaggatgccctgtccaaactgccgctgttcaagcaggcactcaatatgccggccaaa
accgtcagcaaggctccctgccaggaagtgatcctgactggcgatgaagtggatttgacc
aagctgcccattcagcattgctggcccggcgatgtggctcccctgatgacctggggtctg
accatcaccaagggccctcgacagaaacgccagaatctggggatctaccgccagcagctg
ctgggcaagaacaagctcatcatgcgctggctgtcacaccgtggcggcgccctcgacttc
aaggatttccaggaacagcaccccggtgaaaactacccggtggtggtggccttgggcagc
gatcccgtcaccattctcggcgccgtcactccggtgccggacagcatgagcgaatatgcc
tttgccggactgctgcggggcgagcgcaccgaagtggtcaaggccctctcctgcgatctg
gaagtgccggccaccagcgagattatcctcgagggctacatagcccccggcgagatggcc
gaggaaggtccctacggcgatcacaccggctactacaacgagaccgacagtttccccgtg
tttaccgtgacccacatcagtcacaggaaagacgccatctatcacagcacctacaccggg
cggccaccggatgagcccgccatgctgggggtggcgctgaacgaggtatttgtaccgata
ctgcgtaagcagtaccctgaaatcgttgatttttacctgcctcctgagggttgctcctac
cggatggcggtgatttccatccgcaaacagtacccgggccacgccaagcgggtgatgatg
ggcgcctggtccttcctgcgccagtttatgtacaccaagtttatcgtggtggtggatgat
gacgtcaattgccgggactggcaggacgtgatctgggccatcaccacccgtatggatccc
atccgtgacaccctgatggtggacaacacccccatagactatctggacttcgcctcgccg
gttgcgggcctgggctccaagatgggcctggatgccacaaacaagtggccgggagaaacc
cagcgcgaatggggtacgccaatagtcatggatccccaagttaaacaaaaggttgacgag
atctgggaccaattgggcatagacgacagccctaccctataa
DBGET
integrated database retrieval system
