Shewanella cyperi: JYB88_04985
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Entry
JYB88_04985 CDS
T07829
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00730
Thiamine metabolism
scyp01100
Metabolic pathways
scyp01240
Biosynthesis of cofactors
scyp04122
Sulfur relay system
Module
scyp_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYB88_04985 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JYB88_04985 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyp03016
]
JYB88_04985 (thiI)
Enzymes [BR:
scyp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JYB88_04985 (thiI)
Transfer RNA biogenesis [BR:
scyp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JYB88_04985 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
QSX31002
UniProt:
A0A975AL31
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All DBs
Position
1165843..1167297
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLESNIRNVLKKIDEDAKVQRQWDRIMVMVPKDKPE
LESVFAERLACIPGIANVVQVAEYSFTTMDDIYQHALKVYRDVLKDKTFCVRVKRSGQHD
FNSIEVERYVGGGLNQFTEAKGVKLKDPDITVNLEIDRDKLYMVNRRIEGLGGFPMATQE
DVLSLISGGFDSGVASFQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FISVPFDPVVTEILERIDKGLMGVILKRMMMRAATRVADRMGVQALVTGESLGQVSSQTL
TNLNVIDRCTDLLILRPLITMDKQDIINEARRIGTEDFAASMPEYCGVISQRPTVKAVLS
KVEEEELKFSADLLDRVIADAKAIDIREIAATMDAQVAETETVQAVSGNEIVVDIRAPEE
EENKPLELDGVEVKHIPFFKLATAFADLDRSKTYLLYCERGVMSKLQALYLQEQGFTNIK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgtcaagctgtaccccgaaatcatgatgaagagcaaaccggtaagaatg
cgctttaccaaaatgctcgagtccaacatacgcaatgtgctgaaaaagatcgatgaagat
gccaaggtgcagcgccagtgggacaggatcatggtgatggtgcccaaggacaagccggag
ctggaatccgtgtttgccgagcgtctggcctgcattcccggcatcgccaacgtggtgcag
gtggccgagtacagcttcaccaccatggatgacatctatcagcacgcgctcaaggtgtat
cgcgatgtgctcaaagacaaaaccttctgcgtccgggtcaagcgctccggtcagcatgac
ttcaactccatcgaggtggagcgctatgtgggcggcggcctgaaccaattcaccgaggcc
aagggcgttaagctcaaagaccctgatattactgtgaacctggaaatcgaccgcgacaag
ctgtacatggtcaaccgccgtatcgaaggtttgggtggcttccccatggcgacccaggaa
gacgtgctgtcgctgatctccggcggtttcgactcgggtgtggccagcttccagttcatc
aaaaagggcgcccgtacccattactgtttctttaacttgggcggcgcccaacacgagatt
ggcgttaagcaggtggcctaccacctgtggaagacctacggcgaatcacacaaggtcaag
tttatcagcgtgcccttcgatcctgtggttaccgagatcctggagcgtatcgacaagggc
ctgatgggggtgatcctcaagcgtatgatgatgcgcgccgccacccgggtggccgaccgt
atgggcgtgcaggcgctggtaacaggtgagagcctgggccaggtatcgagccagaccctc
accaacctgaacgtgattgaccgctgtaccgacttgctgatcctcaggccgcttatcacc
atggacaagcaggacatcatcaacgaagcccgccgcatcggcaccgaggactttgccgcc
tccatgcccgagtattgtggcgtgatctcccagcgccccacggtcaaggccgtgctgtcc
aaggtggaagaggaagagctcaagttctctgccgatctgctggacagggtgattgccgat
gccaaggccatcgacatacgtgagattgccgccaccatggatgcccaggtggccgagacc
gagacagtgcaggcggtttcaggcaacgagatagtggtggatatccgcgccccagaggaa
gaggaaaacaaaccgctggagctcgatggcgtggaagtgaagcatattcccttcttcaag
ctggccaccgcctttgccgatctcgatcgcagcaagacctatctgctgtactgcgagcgc
ggggtgatgagcaagctgcaggccctctatctgcaggagcagggctttaccaatatcaag
gtatatcgtccctga
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