Shewanella cyperi: JYB88_15940
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Entry
JYB88_15940 CDS
T07829
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_15940 (rimO)
Enzymes [BR:
scyp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JYB88_15940 (rimO)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
ribosomal protein modification factors
JYB88_15940 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Methyltransf_2
CLP1_P
NTPase_1
UPF0180
TRAM
Motif
Other DBs
NCBI-ProteinID:
QSX29664
UniProt:
A0A974XSH6
LinkDB
All DBs
Position
3591305..3592729
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AA seq
474 aa
AA seq
DB search
MNKSVETFDPKQTTTLDTPAKTLAQQASTADGQTGGNRIGFVSLGCPKNLVDSERILTQL
RIDGYEVTNSYANADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQIR
EVHPDVLEITGPHSYEAVLSHVHKYVPKPEHNPFTSLIPQTGVKLTPKHYAYLKISEGCD
NRCTFCIIPALRGDLDSRGAGSVLDEAKRLVESGVQEILVVSQDTSAYGKDKGGRTDFWN
GMPVKQDIVSLARQLGKMGAWIRLHYVYPYPWVDDLIPLMAEGLILPYLDMPLQHASPRV
LKMMKRPGRVDKQLEAIKKWREICPELVIRSTFIVGFPGETEEDFELLLDFLREARLDRV
GCFKYSEVEGAVANTLAELISEEVKEDRYERFMAVQAEISAERLARLVGRELDILIDDVD
EEGAIGRSYADAPEIDGMVFINGETELEPGMLVRAVITHSDEHDLWAELVQLPE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaatcagttgaaacctttgatcccaagcaaaccacgaccctggataccccggcc
aaaaccctggcccagcaggcgtcaacggccgacggccagaccggcggtaaccgcattggg
tttgtcagcctgggctgcccgaaaaacctggtggattcagagcggatcctgacccagctg
cgtatcgacggctacgaagtgaccaacagctatgccaatgccgatctggtgatagtcaac
acctgcggctttatcgatgccgcggtggaagagtccctggatgcggtgcgtgaagcactg
gaagaaaacggcaaggtgatagtcaccggctgtctgggtgccaaggaaaaccagatccgt
gaggtgcaccctgacgtgctggaaatcaccggcccccacagctacgaagccgtgctcagc
cacgtacacaagtacgtgcccaagccggagcacaacccttttacctcgctgatcccccag
accggggtcaagctgacgcccaagcactatgcctatctgaagatctccgaaggctgcgac
aaccgctgcaccttctgcatcatcccggcgttgcgtggcgatctcgacagccgtggcgcc
ggcagcgtactcgacgaggccaagcgcctggtggaaagcggcgtgcaggagatcctggtg
gtcagccaggacacctcggcctacggcaaggacaagggcggccgcaccgacttctggaac
ggcatgccggtgaaacaggacatagtcagcctggcacgtcagcttggcaagatgggcgcc
tggatccgtctgcactatgtgtatccttacccctgggttgatgacctgatccccctgatg
gccgaaggtttgatcttgccttacctggacatgccgctgcaacacgccagcccgcgcgtg
ctgaagatgatgaagcgcccgggccgcgtcgacaagcagttggaagccatcaagaaatgg
cgtgaaatctgtcccgagctggtgatccgctctaccttcatcgttggcttccccggtgaa
accgaagaagactttgagctgctgttggacttcctgcgtgaagcccgtctcgaccgcgtc
ggctgcttcaagtattcagaagtggaaggcgccgtggccaacacgctcgcagagcttatc
agcgaagaagtgaaggaagacaggtacgaacgctttatggcggtgcaggccgagatcagt
gccgagcgtctggcacgcctggtgggccgtgagctggatatattaatcgacgatgtggac
gaggaaggcgccattggccgctcctacgccgatgccccggagatcgatggcatggtgttt
atcaacggcgaaaccgaacttgagccgggtatgctggtgcgtgccgtgatcacccattcc
gacgagcacgacctgtgggccgagctggtacagctgcctgagtaa
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