KEGG   Streptococcus dysgalactiae subsp. equisimilis AC-2713: SDSE_0340
Entry
SDSE_0340         CDS       T02333                                 
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
sdc  Streptococcus dysgalactiae subsp. equisimilis AC-2713
Pathway
sdc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SDSE_0340 (rpoE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdc03021]
    SDSE_0340 (rpoE)
   03400 DNA repair and recombination proteins [BR:sdc03400]
    SDSE_0340 (rpoE)
Transcription machinery [BR:sdc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SDSE_0340 (rpoE)
DNA repair and recombination proteins [BR:sdc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SDSE_0340 (rpoE)
SSDB
Motif
Pfam: HARE-HTH
Other DBs
NCBI-ProteinID: CCI61845
LinkDB
Position
303908..304486
AA seq 192 aa
MKLDVFAGQEKSELSMIEVARAILEERGRDHEMYFSDLVNEIQNYLGKSDADIRHALPFF
YTDLNTDGSFIPLGDNKWGLRSWYAIDEIDEEIITLEDDEDGAQKRKKKRVNAFMDGDED
AIDYSDDDPEDEDFTEESADIEYDEEDPDDEKSEVESYDSELNEIIPEDDFEEVDINEED
EEEEEDEDEDEE
NT seq 579 nt   +upstreamnt  +downstreamnt
ttgaaattagacgtatttgcaggacaagaaaaaagcgaactttccatgattgaagtggcg
cgtgccattttggaagagcgtggtcgcgatcatgagatgtactttagcgacttagtgaat
gagattcaaaactacttaggaaaatctgatgcagatattcgtcatgcattgccatttttc
tacactgacttaaatacggatggctcatttattcctcttggtgataacaaatggggcctt
cgctcatggtatgccattgatgaaatcgatgaggaaatcattaccttggaagatgatgaa
gacggcgcacagaaacgtaagaaaaaacgagttaatgcctttatggatggggacgaagac
gctattgattatagtgatgatgacccagaagatgaagattttacagaagaatcagctgat
attgagtacgatgaagaagatcctgatgatgaaaaatcagaagtggaatcttacgactca
gagttaaacgaaattattccagaagatgattttgaggaagttgatatcaacgaagaagat
gaggaagaagaagaggatgaggacgaagacgaggaataa

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