Saccharophagus degradans: Sde_0503
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Entry
Sde_0503 CDS
T00335
Name
(GenBank) thiamine biosynthesis protein
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sde
Saccharophagus degradans
Pathway
sde00730
Thiamine metabolism
sde01100
Metabolic pathways
sde01240
Biosynthesis of cofactors
sde04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sde_0503
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Sde_0503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_0503
Enzymes [BR:
sde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Sde_0503
Transfer RNA biogenesis [BR:
sde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sde_0503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
ABD79767
UniProt:
Q21NG2
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All DBs
Position
615993..617444
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AA seq
483 aa
AA seq
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MRFVVRLFPEISIKSAPVRKRWTKMLTDNLRLMAKRIHPTARVNKEWDRIEVTAKVDDPV
VEGQLIDMLARTPGIANFSHVQTHPFESLHDIYELVQASWGDQLKGKTFCVRVKRTGNHD
FTSTEVERYVGGGLNQNNPTGGVKLKDPDVSIGLEVKDDQVYLVTKKYQGLGGFPMGTQE
SVLSLISGGYDSTVASFQMIKRGLRTHYCFFNLGGREHELAVKEIAFFLWNRFGSTHRVR
FISVPFEGVVGEILQKVGPSNMGVVLKRMMLRAGERIAERGGIEAMVTGEAVAQVSSQTI
PNLSVIDSVTDMMVLRPLIVMDKRDIIDISRKIGAEEFSAAVPEYCGVISVKPSAKVNRA
KLEAEEEKFDFSILEHALENAVVQSIDEVMDDAQELAEVELVSELPVSAKVIDIRHHTEQ
ELRPLTVEGREVLEIPFYQLSTAYAELDKAVNYYLFCDKGVMSGLHARHLLDAGYTNVGV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgttgttcgtttattccctgaaatatccatcaaaagtgcccccgtgcgcaag
cgctggacaaaaatgctaaccgataacttacggttgatggctaagcgtatccatccaacc
gctagggtgaacaaagagtgggatcgtatcgaggtgacggccaaggtggatgaccccgtt
gtggaggggcagttaatcgatatgttggcgcgtacaccgggaattgcgaacttttcccat
gtgcaaacgcacccttttgaatcattgcatgatatttacgagttggtacaagcatcatgg
ggtgaccaacttaagggcaaaaccttttgtgtgcgagtaaagcgcactggcaaccacgat
tttacttctaccgaagtcgagcgctatgtgggtggtggccttaatcaaaataaccccact
ggcggcgtaaaactaaaagaccctgatgtgtctattggtttggaagtaaaagatgatcag
gtgtatttggtaaccaaaaaatatcagggcttaggcggcttccccatggggacgcaggag
tctgtgctatctcttatctctggcggctacgattctaccgttgccagctttcaaatgatc
aagcgcggtttgcgcacccattactgcttttttaatttaggggggcgcgagcacgagcta
gcagttaaagaaatcgcgttctttttatggaatcgattcggttctactcaccgcgtgcgt
tttatctcggtgccgtttgaaggtgttgtaggggaaattctgcaaaaggttggcccttca
aatatgggcgtagtacttaagcgtatgatgttgcgtgcaggtgagcgcattgccgagcgc
ggcggtattgaggcaatggtgaccggcgaggcggtggcgcaggtatcgagccaaaccatt
cccaacttatctgtgattgatagcgttaccgatatgatggtattgcgaccgcttattgtg
atggataaacgcgatattattgatatctcccgcaaaattggcgcagaagagttctctgct
gctgtgcctgagtattgcggtgttatttcggtaaaaccctctgcaaaagtgaatcgtgcc
aagcttgaggcggaagaagaaaagtttgatttttctatcctcgaacacgcgctagaaaac
gcggtagtgcaatctatcgatgaggtgatggatgatgcgcaagagcttgccgaggttgaa
ttggtgtcggaattgcccgtcagtgccaaagttattgatattcgccatcacaccgagcaa
gaactgcgaccccttactgttgaagggcgcgaagtgttggaaatacctttttaccaatta
agcacagcttatgcagagttggataaagccgttaactattatttattttgcgataagggg
gtaatgagcgggctgcatgctcggcatttgctagatgctggctatactaatgtaggtgtt
tatcggccttag
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