Streptomyces deccanensis: L3078_27060
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Entry
L3078_27060 CDS
T08215
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L3078_27060 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdec01007
]
L3078_27060 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdec03016
]
L3078_27060 (lysS)
Enzymes [BR:
sdec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
L3078_27060 (lysS)
Amino acid related enzymes [BR:
sdec01007
]
Aminoacyl-tRNA synthetase
Class I (A)
L3078_27060 (lysS)
Transfer RNA biogenesis [BR:
sdec03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
L3078_27060 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
VipB_2
Motif
Other DBs
NCBI-ProteinID:
ULR52637
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Position
6073541..6075286
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AA seq
581 aa
AA seq
DB search
MPIVAQSTETTDWVSRFADEVIEESERRAPGKPVVVASGLSPSGPIHLGNLREVMTPHLV
ADEIRRRGHQVRHLISWDDYDRYRKVPNGVDGVDGSWAEHIGKPLTSVPAPHGSAHPNWA
EHFKAAMVDALAEMGVEFDGISQTAQYTSGVYREQILHAMKHRGDIDAILDQYRTKKAPA
KQQKQQKPLDEAEIEAAEGSGAAGEDDGSSGAAGYFPYKPYCGGCGKDLTTVTAYDDDST
ELTYTCTACGFSETVALNEFNRGKLVWKVDWPMRWAYEGVVFEPSGVDHSSPGSSFQVGG
QIVGIFGGKQPIGPMYAFVGISGMAKMSSSKGGVPTPSDALKIMEPQLLRWLYARRRPNQ
SFKIAFDQEIQRLYDEWDKLDAKVADGSALPADVAAHSRAVGTAAGELPRTPRPMPYRTL
ASVADITAGAEDQTLRILSELDPTDPLSGLDEVRPRLDKAEAWINTHVPADQRTIVRQEA
DAELLKSLDEASQQSLRLLLDGLAEHWSLDGLTHLVYGVPKVQAGFSADATPKELPAEIK
TAQRSFFALLYHLLVGRDTGPRLPTLLLAVGQERVRALLGE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcgtggctcagagcaccgagaccaccgactgggtctcccgtttcgcggatgag
gtcatcgaggagtcggagcgtcgggccccgggcaaaccggtcgtcgtcgcgtccggcctg
tcgccgtccggcccgatccacctcggcaacctccgcgaggtcatgaccccgcacctcgtc
gccgacgagatccgccgccgcgggcaccaggtccggcatctgatctcctgggacgactac
gaccgctaccgcaaggtcccgaacggcgtcgacggcgtcgacggctcctgggccgagcac
atcggcaagccgctcacctccgtgcccgccccccacggctccgcccaccccaactgggcc
gagcacttcaaggcggcgatggtcgacgcgctcgccgagatgggcgtcgagttcgacggg
atcagccagaccgcgcagtacacctccggtgtgtaccgcgagcagatcctgcacgccatg
aagcaccgcggcgacatcgacgcgatcctcgaccagtaccggaccaagaaggccccggcc
aagcagcagaagcagcagaagccgctcgacgaggccgagatcgaggccgccgagggctcc
ggcgccgccggtgaggacgacggcagctccggcgccgccgggtacttcccgtacaagccc
tactgcggcggctgcggcaaggacctcaccaccgtcaccgcctacgacgacgactccacc
gagctgacctacacctgcaccgcctgcggcttctccgagaccgtcgcgctgaacgagttc
aaccgcggcaagctcgtctggaaggtcgactggccgatgcggtgggcgtacgagggcgtc
gtcttcgagccgagcggcgtcgaccattcctcgccggggtcgagcttccaggtcggcggg
cagatcgtcgggatcttcggcggcaagcagcccatcgggccgatgtacgccttcgtcggc
atcagcggcatggccaagatgtcctcgtccaagggcggggtgccgacgccctccgacgcg
ctgaagatcatggagccgcagctgctgcgctggctctacgcccgccgccggcccaaccag
tccttcaagatcgccttcgaccaggagatccagcggctctacgacgagtgggacaagctc
gacgccaaggtcgcggacggatccgccctgcctgccgatgtcgccgcgcactcccgcgcg
gtgggcacggccgccggtgagctgccgcgcacgccccgcccgatgccgtaccggaccctc
gcgtccgtcgccgacatcacggcgggcgccgaggaccagaccctgcgcatcctcagcgaa
ctcgaccccaccgacccgctgtccggtctcgacgaggtacggccgcggctcgacaaggcc
gaggcctggatcaacacgcacgtccccgccgaccagcggaccatcgtgcgccaggaggcc
gacgccgagctgctgaagtccctcgacgaggcgtcccagcagtcgctgcggctgctgctc
gacgggctcgccgagcactggtcgctcgacgggctcacgcatctcgtctacggcgtgccc
aaggtgcaggccgggttctcggcggacgccacgcccaaggagctgccggcggagatcaag
acggcccagcggtcgttcttcgccctgctgtaccacctgctcgtcgggcgggacacgggg
ccgcgcctgcccacgctgctgctggcggtggggcaggagcgggtgcgggccctgctcggg
gagtag
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