Streptomyces deccanensis: L3078_33180
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Entry
L3078_33180 CDS
T08215
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdec03009
]
L3078_33180 (rimO)
Enzymes [BR:
sdec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L3078_33180 (rimO)
Ribosome biogenesis [BR:
sdec03009
]
Prokaryotic type
ribosomal protein modification factors
L3078_33180 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ULR53740
LinkDB
All DBs
Position
7477285..7478766
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAQRQESAAEVALPGHAPVDLPEGIAPASGPRSPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPAVLRSMRRFGDTDRFLELLDTIRGKAPEAGVRSNFIVGFPGETEDDLAELERFLN
GARLDAIGVFGYSDEEGTEAATYENKLPEDVVAERLARVSRLAEELVSQRAEERVGQTVR
VLVESVDGDEGAYGRGAHQAPETDGQVLFTNGEGLSVGLMVEAKVVDTEGVDLVAEVLPG
SLASPACTEEAAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggacgccgag
gaagcggacgtcgcggtcgtcaatacctgtggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctgctggaggccaatgacctcaagggacacggcagaacccaggccgtcgtg
gcggtcggctgcatggccgagcggtacggcaaggaactggccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactacgcggacatctccgaccgtctgcagaccatcctg
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggcccagcggcaggagtccgcggccgaggtcgcgcttccggggcacgcccccgtcgat
cttccggaaggcatcgctccggcctcggggccgcgttccccgctgcgccgccgcctcgac
ggctcacccgtcgcctccgtgaagctcgcctccggctgcgaccgccgctgctccttctgc
gccatcccctccttccgcggctccttcatctcccgacgcccctcggacgtgctgaacgag
acccgctggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcgtacggcaaggacctgggcgacatccggctgctggagtccctgctgcccgagctcgcc
gaggtcgacggcatcgagcgcgtgcgcgtcagctacctccagcccgccgagatgcggccc
ggcctgatcgacgtgctcacctccacccccaaggtcgcgccctacttcgacctctccttc
cagcactccgcccccgcggtgctgcgttcgatgcgccgcttcggcgacaccgaccggttc
ctggagctgctggacaccatccgcggcaaggcccccgaggccggcgtccggtccaacttc
atcgtgggcttccccggtgagaccgaggacgacctcgcggagctcgagcggttcctgaac
ggcgcgagactggacgccatcggtgtcttcggatactccgacgaggagggcaccgaagcg
gcgacgtacgagaacaagctgcccgaggacgtcgtcgccgagcggctcgcgcgggtctcg
cgcctggccgaggaactggtctcgcagcgcgccgaggagcgcgtcggacagaccgtgcgc
gtgctggtcgagtcggtcgacggcgacgagggcgcctacggccgcggcgcgcaccaggcg
cccgagacggacggccaggtgctgttcacgaacggcgagggcctgagcgtcggccttatg
gtcgaggcgaaggtggtcgacacggaaggcgtcgacctggtggccgaggtgctcccgggc
tcgctcgcctcccccgcgtgtactgaggaggcggccagatga
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