Stutzerimonas degradans: GOM96_16325
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Entry
GOM96_16325 CDS
T08431
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeg03009
]
GOM96_16325 (rlmF)
Enzymes [BR:
sdeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
GOM96_16325 (rlmF)
Ribosome biogenesis [BR:
sdeg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GOM96_16325 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Methyltransf_25
PrmA
Motif
Other DBs
NCBI-ProteinID:
QGW22503
LinkDB
All DBs
Position
complement(3469963..3470955)
Genome browser
AA seq
330 aa
AA seq
DB search
MSVRKPKAPASAKPDRPLLHPRNRHSGRYDFPALIAGCPALADFVIVNPYGKQSIDFADP
AAVKVFNRALLKQFYGIEHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGSIPRGRQIR
ALDIGTGANCIYPLIGHCEYGWRFTGSDIDTVALNAAQAIVAANRLSDAIELRRQPDRRH
IFQGLLQADERFDLSLCNPPFHASVSEATAGSQRKWRNLGKLDPKRKLPVLNFGGQAAEL
WCEGGEAAFIARLAEESVAVSQQICWFSTLVSKGGNVAPLQARLRRLGAREVRTLDMAQG
QKRSRFVAWTFLDVDQRAQWRARRGLQQQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccgcaaacccaaggccccggccagcgccaagcccgaccgcccgctcctgcat
ccgcgcaaccgccacagcgggcgctacgatttccctgcgctgatcgccggctgcccggcg
ctggccgacttcgtcatcgtcaatccgtacggcaagcagagcatcgatttcgccgacccg
gccgcggtgaaggtattcaaccgcgcgctgctcaagcagttctacgggatcgagcactgg
gacatcccagccggctacctgtgcccgcccgtacccgggcgcgccgactacctgcatggc
ctggccgacctgctggccgccgacaacgccggaagcattccgcgcggccggcagatccgt
gcgctggatatcggcaccggggccaactgcatctatccgctgatcgggcactgcgagtac
ggctggcgcttcaccggctcggatatcgacaccgtcgcactgaacgccgcgcaggcgatc
gtcgcggcgaaccggctgagcgacgccatcgagctgcgccggcagcctgatcgccggcac
atcttccagggtctgctgcaggcggacgagcgcttcgatctcagcctgtgcaacccgccg
tttcatgcctcggtcagcgaagcgacggccggcagccagcgcaaatggcgcaacctcggc
aagctcgaccccaagcgcaagctgcccgtgctgaacttcggcggacaggcagcggagctg
tggtgcgagggcggtgaggcggcgtttatcgcccggctggccgaggaaagcgtggcggtc
agccagcagatctgctggttcagcacactggtctcgaaaggcggcaacgtcgccccgctg
caggccaggctgcgcaggctaggggcgcgggaggtacggacgctggacatggcccagggc
cagaagcgcagccgcttcgtggcatggacctttctggacgtggatcagcgtgcgcaatgg
cgcgcacggcgtgggttacaacaacaggtctga
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