Shewanella decolorationis: D0436_12725
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Entry
D0436_12725 CDS
T09167
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00860
Porphyrin metabolism
sdeo01100
Metabolic pathways
sdeo01110
Biosynthesis of secondary metabolites
sdeo01120
Microbial metabolism in diverse environments
sdeo01240
Biosynthesis of cofactors
Module
sdeo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
D0436_12725 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdeo04147
]
D0436_12725 (hemB)
Enzymes [BR:
sdeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
D0436_12725 (hemB)
Exosome [BR:
sdeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
D0436_12725 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
DUF2336
Motif
Other DBs
NCBI-ProteinID:
QDZ91256
UniProt:
A0A5B8QZ70
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All DBs
Position
complement(2223869..2224867)
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AA seq
332 aa
AA seq
DB search
MSSTRENPLKPLRRLRRLRRTEAMRDLVRETQISLSDLVHPLFIEEHITQAVPISTLPGI
SRLPESALADEIQRLYALGIRYVMPFGISHTKDAQGSDTWDDNGLLARMIRTIKTTAPEM
MVIPDICFCEYTDHGHCGVLHHDEVCNDQTVANLVKQSITAAKAGADMLAPSAMMDGQIK
AIRQGLDEAGFEHIAILAHAAKFASSFYGPFRAAVDCELSGNRKGYQLDYANGRQALLEA
LLDEEEGADILMVKPGTPYLDVLSRLRQETHLPLAAYQVGGEYAGIKFAALAGALDERAV
VTETFIGLKRAGADLIVSYYAKQYAEWLAQSR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaccagagaaaatccccttaaaccccttcgccgtttaagacgcctacgccgc
acagaagcgatgcgtgacctagtgcgtgaaacccagatttccctaagcgacttagtccac
ccactctttattgaagagcacatcacccaagccgtgcccatttcaaccttgccggggatc
agccgtctgcccgaaagtgcgcttgctgatgaaattcaaaggctttacgcattagggatc
cgctatgtgatgccctttgggatttcccataccaaagatgcacagggcagcgacacttgg
gatgacaatggtttactcgcgcggatgatccgcaccatcaaaaccaccgcgccagagatg
atggtgatccccgatatttgtttttgtgaatataccgaccacggacactgcggcgtattg
caccatgacgaagtctgtaacgatcaaaccgtggctaacttagtcaaacaatccattacc
gccgccaaagccggagctgatatgctggcgccatcggcgatgatggacggccagattaaa
gccattcgccaaggactggatgaggcaggctttgaacacattgccattttggcccatgca
gccaaattcgcctcctccttctatgggccttttagggccgcggtggattgtgaacttagt
ggaaaccgtaaaggctaccaactcgattacgccaatggtcgccaagccttgctcgaagcg
ctgctcgatgaagaggaaggcgcggatattttgatggtgaaacccggcacgccctatttg
gatgtgttaagtcgcctaagacaagaaacccaccttcccttagcggcttatcaagtcggc
ggcgaatatgccggcattaagtttgccgccctggcgggcgccctcgatgagcgcgccgtc
gtcaccgaaacctttatcgggttaaagcgtgccggcgccgatttaattgttagttattac
gcaaaacaatatgccgagtggttagcgcaatcccgttaa
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