Shewanella decolorationis: D0436_15395
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Entry
D0436_15395 CDS
T09167
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00730
Thiamine metabolism
sdeo01100
Metabolic pathways
sdeo01240
Biosynthesis of cofactors
sdeo04122
Sulfur relay system
Module
sdeo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D0436_15395 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
D0436_15395 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_15395 (thiI)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
D0436_15395 (thiI)
Transfer RNA biogenesis [BR:
sdeo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D0436_15395 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
QDZ91733
UniProt:
A0A5B8QYG6
LinkDB
All DBs
Position
1657385..1658839
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIWVKVPNDKPE
LAQAFGERLACIPGIAHVVQVDEYSFTSVDDIYQQVLPVYRDQIAGKTFCVRVKRTGSHD
FNSIEVERYVGGGLNQFTDAIGVRLKNPEVTVNLEIEGDKLYMVTKRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERMGIQAIVTGESLGQVSSQTL
TNLNVIDRCTDMLILRPLIAMDKQDIINECRRIGTEDFAKSMPEYCGVISQKPTVKAVLA
KIEAEETKFSEDLIDRIVEQAVAIDIREIAEQMNTRITETETVVAIDTNEVVIDIRAPEE
EENKPLEIEGVEIKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYHNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtacccagaaatcatgatgaagagcaagcccgtgcgcatg
cgcttcaccaaaatgcttgaaaccaacatccgtaacgtgctcaaaaaagttgatgaagat
gccaaagtgcaacgtcaatgggaccgtatttgggtaaaggtgccaaatgataaacctgaa
ttagctcaggcctttggtgagcgtttagcctgtattcctgggattgcccatgtggtgcaa
gtggatgaatacagctttacctcagtcgacgatatctaccagcaagtcttacccgtttac
cgtgaccaaattgccggtaaaaccttctgtgtgcgcgttaaacgcacaggctcccacgat
tttaactctatcgaagtcgagcgttatgtcggtggcggtttaaaccagtttaccgatgcg
attggcgtgcgtttgaagaacccagaagtgacagttaacctcgaaatcgagggcgataaa
ctgtatatggtgactaagcgtatcgaaggcttaggcggcttcccaatggcgacacaggaa
gatgtgttgtccttgatttcgggtggttttgactcaggcgtgtcgagctaccaatttatt
aagaagggggctcgaacccattactgtttcttcaatctcggcggcgcgcagcatgaaatt
ggtgttaagcaggttgcttaccatttgtggaaaacctatggtgaatcccacaaggtgaag
tttgtgtctgtgccgttcgagcctgtggtggccgagattttagagaaaatcgacaacggt
caaatgggcgtggtgctcaagcgtatgatgatgcgcaccgcggcgcgtatcgcagaacgt
atgggcattcaggcgattgtgacaggtgagagtttaggccaagtatcgagccaaacctta
actaacttgaacgtgattgaccgctgcaccgatatgttgatcctgcgcccgctgatcgcc
atggacaagcaggatatcatcaacgaatgccgccgtatcggtaccgaagattttgctaaa
tctatgcccgaatattgcggcgtgatttcgcaaaagccaaccgtgaaggcggtactggcc
aagattgaggctgaggagaccaaattctctgaggacttgattgaccgtatcgttgagcag
gctgttgccattgatatcagggagatagcagaacaaatgaatacgcgtatcactgaaact
gaaaccgttgttgctatcgacaccaatgaagtggtgattgatattcgcgctccagaggaa
gaagagaacaagccgctggagattgaaggtgtggaaatcaagcgcattccgttcttcaaa
ttagcgactcaatttgccgatctcgataagcagaagacttacctgttgtactgcgagcgt
ggggtgatgagtaaattacaggcgctatacctgattgagcaaggttatcacaatgttaag
gtttaccgcccataa
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