KEGG   Staphylococcus devriesei: Q2T90_03365
Entry
Q2T90_03365       CDS       T09366                                 
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
sdev  Staphylococcus devriesei
Pathway
sdev03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sdev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Q2T90_03365 (rpoE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdev03021]
    Q2T90_03365 (rpoE)
   03400 DNA repair and recombination proteins [BR:sdev03400]
    Q2T90_03365 (rpoE)
Transcription machinery [BR:sdev03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Q2T90_03365 (rpoE)
DNA repair and recombination proteins [BR:sdev03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Q2T90_03365 (rpoE)
SSDB
Motif
Pfam: HARE-HTH
Other DBs
NCBI-ProteinID: WKU13982
LinkDB
Position
complement(654118..654657)
AA seq 179 aa
MKIQDYTKEMVDEKSFIDMAYTLLNDKGTTMNLYDIIDEFRNLGHYEYEEIENRVIQFYT
DLNTDGRFLNVGENQWGLRDWYSVDDIEEKIAPTIQKFDILDDEDEEDKNLKLLGEDEMD
DDTDIPAQTDDQETLDDSEDEQVEDEIAESDLVIQEDDEDLDDEEDELDDDEEDKDFNN
NT seq 540 nt   +upstreamnt  +downstreamnt
atgaagatccaagattatactaaagaaatggtcgatgagaaatcatttatcgacatggct
tatactttattaaatgataaaggcactacaatgaatttatacgatattatcgatgaattt
agaaaccttggtcattatgaatacgaagaaattgaaaaccgtgtgattcaattctacaca
gatttaaatactgatggacgctttttaaacgttggagagaatcaatggggattacgtgat
tggtattcagttgatgatattgaagaaaaaatcgcaccaacgattcaaaaatttgatatc
cttgatgacgaagacgaagaagataaaaatcttaaattattaggcgaagatgagatggat
gatgataccgatattcctgctcaaacagatgatcaagaaacgttagatgatagtgaagat
gagcaagtagaagatgaaattgctgaatctgaccttgtcattcaagaagatgacgaagat
cttgatgatgaagaagatgaactagatgacgatgaagaagataaagattttaataactaa

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