Shewanella dokdonensis: KHX94_05980
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Entry
KHX94_05980 CDS
T07469
Name
(GenBank) DNA cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00270
Cysteine and methionine metabolism
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
KHX94_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdk03000
]
KHX94_05980
03032 DNA replication proteins [BR:
sdk03032
]
KHX94_05980
03036 Chromosome and associated proteins [BR:
sdk03036
]
KHX94_05980
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sdk02048
]
KHX94_05980
Enzymes [BR:
sdk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
KHX94_05980
Transcription factors [BR:
sdk03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
KHX94_05980
DNA replication proteins [BR:
sdk03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
KHX94_05980
Chromosome and associated proteins [BR:
sdk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
KHX94_05980
Prokaryotic defense system [BR:
sdk02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
KHX94_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QVK24136
LinkDB
All DBs
Position
1240204..1241157
Genome browser
AA seq
317 aa
AA seq
DB search
MKIKKPKVISLFSGAGGLDLGFKNAGFDIVWANDFDKDACNTYTHNIGSHIVCGSIEDID
SNEIPEADIIIGGFPCQGFSQANLLRFADDERNKLYLEFLRVVKDKKPKLFFAENVSGIL
SLAKGEAIKKIENDFSLAGYSVKKKLFNVADYGVPQSRKRVIIVGVRKDLNIDYDFPIAT
HTSPSKAKKEQLLPWVSISKALEDIPDADDADHGLLNHDYSKYKITNRNFTGHRKTDPEK
PSPTILARGNGKGGVCAIQHPKNHRRMSVRESATIQTFPKSFEFFGSLTSCYRQVGNAVP
VKFAEQLALALKNKIGE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaaacctaaagtaatatcactattttcaggcgctggaggactagacctc
ggatttaaaaatgcggggtttgatattgtctgggcaaatgactttgataaagatgcttgc
aatacgtatacacacaatatcggttcacatattgtttgtggttctattgaggatatagat
tcaaatgaaatccctgaagccgatataattattggtggttttccttgccaaggattttct
caggcaaatcttcttcgatttgctgacgacgaaaggaataaactgtaccttgaatttctt
cgtgttgtaaaagataaaaagccaaaattatttttcgctgaaaatgtcagtggaatattg
agtttagcaaaaggagaagcaattaaaaaaatagaaaatgatttttcactagcaggatac
tcggtcaagaaaaaactgtttaatgtagcagattatggggtcccacagtcaagaaaaagg
gtaattattgtaggtgtaagaaaagatctaaatatagattatgactttcctatagcgact
cacacatccccaagtaaagcaaaaaaagaacagttgcttccttgggtatcaataagtaaa
gccttagaagacataccagatgctgacgatgccgatcatgggttactaaatcatgattac
tcgaagtataaaattacaaacagaaacttcacaggccacagaaaaacagatccagaaaag
ccttcaccgacaatactagctagaggtaacggaaaaggaggagtatgcgccattcaacat
cccaaaaatcatcgaagaatgtcagtgagagaatcagctacaattcagacatttccaaag
agtttcgaattttttggaagcctaacatcatgttatcgtcaagttggaaatgctgtaccc
gtgaaatttgctgaacaactggccttagctttaaaaaataaaattggtgaataa
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