Shewanella dokdonensis: KHX94_06905
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Entry
KHX94_06905 CDS
T07469
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00052
Galactose metabolism
sdk00511
Other glycan degradation
sdk00600
Sphingolipid metabolism
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
KHX94_06905
09103 Lipid metabolism
00600 Sphingolipid metabolism
KHX94_06905
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
KHX94_06905
Enzymes [BR:
sdk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
KHX94_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Gryzun
Motif
Other DBs
NCBI-ProteinID:
QVK24267
LinkDB
All DBs
Position
complement(1429231..1432362)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLGRIKNQLQGKVWLLLVSIFCSQALAVTQNDWENPSVFDINKLPDRAYFISYPSIKLAQ
AAQPQQSSQYYSLNGEWHFNFSTQPEKRPKDFYKADYDVSSWKLIKVPSTWQLQGYDYPI
YSNINYPFPKNKPFIDHKYNPVGSYKRDFMVADDWRGKRIILHFGAVSSAFYVWVNGQKL
GYSQDGKLPAEFDITDYIKSGKNQLAVEVYRWSDGSYLEDQDFWRMSGIERNVFLQIVPK
VQLWDFRVQTSLKNHYQDGKLNLSVKIANNEKAAKKVKVVATVYDGQKQLWTQQQETVAT
DATSLLTFTHDFTDIQAWSAEIPKRYELLLTLQQSGQEDQVVRQFFGFREVKIAHGQLLV
NGQPIIIKGVNRHEHDPVTGHTISHESMLTDITLMKQFNINTVRSSHYPNDPYWYELCDK
YGLYVIDEANIEAHAYQFAEDGLGNDPSFKAAILDRVHGMIERDKNHPSIISWSLGNEIS
PGVNIAAAYNMAKSMDDNRIVQFETRETWFKERMTDVIGWMYADRKELEDKYLNKYPEQP
FIWIEYAHAMGNSTGNLKELWDFVDKHPQVQGGSIWDWVDQGLQKKDANNNIYYGYGGDF
EPKGVANDGNFNANGLVGSDRKPHPALYEVKKIYQNIAVQRLGDDKYLIKNNNFFKDLQD
VRGHWALLENGQIVAQADIAKLATPPQHSEELTIDALRHYPFISGREYAVNFRFFTNQAE
GLIPQQHEVANAQIILHSGSQTVNVPASNDIKLQQVGDSVNISAGDAAMVFDSKSGRLVS
YQVSGKELIKSPLVPNFWRAFTDNDYGNGFDKVIPYYKEAGDKAEVISANVEKTANGTAM
LKFALRFPTLNSNGSLSYTIGKDGAVAVDYQAHLAKDLPEMPRFGLKLQLPEGFDHVKWY
GRGPWANYQDRKESAYLGIYDADVSELYTPYIRPQENGNRSDVRWLEIRDQQGLGLRISG
APQFDFTAHHNTIADFDYPKDGPNRHTTDIVPRPLTELCLDLRQRGVGGDNSWGAAPYKA
YQMLPAEQQDYRLQLTLTPLHAR
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttaggacgtatcaaaaatcagctacaggggaaagtatggctgctacttgtctcgata
ttttgtagtcaagctttggccgtaacgcaaaatgattgggaaaacccaagtgttttcgat
attaataaattgccagatcgcgcttactttatctcttatccttccattaaattagcacaa
gctgcgcaaccgcagcagtccagccaatattactcactcaatggtgaatggcatttcaac
ttttctacacagccagaaaaaagacctaaagacttttacaaagcagattatgatgtttca
tcatggaagttaattaaagtaccctcaacatggcaattacaagggtatgattatcctatc
tattcgaatatcaattatccatttcctaagaataaaccctttatagaccacaaatataat
cccgtaggttcatataaacgtgattttatggttgccgatgattggcgcggcaaacggatt
attttacattttggagccgtatcttccgcattttatgtctgggtaaatggtcagaaacta
ggttatagccaagatggtaaattgcccgcagagtttgatattactgattatatcaaatct
ggaaaaaatcaattagcagtagaagtctatcgctggagtgatggcagttatttagaagac
caagatttttggcgtatgagtggtatagaacgcaatgtctttttacagattgtacctaaa
gtacaattgtgggatttccgtgttcaaacctctttaaaaaaccattatcaagatggcaaa
ttaaatttatcagtaaaaattgctaacaacgaaaaagcggcaaagaaagtcaaggtagtc
gccactgtttatgatgggcaaaagcaattgtggacgcaacagcaagaaacagtagctacc
gatgccacatcattactcaccttcacacatgactttactgatatacaggcgtggtctgct
gaaatacccaaacgttatgagctgttgttaacgttacaacagtcaggacaagaagatcag
gttgtgcgccaattctttggtttccgagaagtaaaaattgcccatgggcagctgttagtg
aatggacagcctattattattaaaggcgttaatcgtcatgaacacgatccagtcactggg
catactattagccacgaaagtatgcttactgatattacactaatgaagcagtttaatatc
aacacagttcgttcttctcattatccaaatgatccttactggtatgaattgtgtgataag
tatggcctctacgtaatagatgaggctaatattgaagctcatgcctatcaatttgctgaa
gatggtctaggtaatgatccaagttttaaggctgcaatccttgaccgcgtccatggcatg
atagaaagggataaaaatcatccatccattatttcttggtctctgggaaatgaaattagt
ccaggagtgaatattgctgcggcctataacatggcaaagtccatggatgataatcggatt
gtacaatttgaaaccagagaaacctggttcaaagaaagaatgacagatgtgattggctgg
atgtatgccgatcgcaaagagctggaagacaagtatttaaataaatatccagaacagcca
tttatctggatagaatatgctcatgccatgggaaatagtaccggcaacttaaaagaacta
tgggattttgttgataaacatccgcaggttcaaggcggcagtatttgggattgggttgat
caaggcttacagaaaaaagatgctaataataatatctattatggctatggtggcgatttt
gagccgaaaggcgtggcgaatgatggtaatttcaatgccaatggtttagtcggttcagat
cgtaaacctcatcccgccttgtatgaagtgaagaaaatatatcagaacattgccgttcag
cgtttaggcgatgataaatatctgattaaaaacaataacttttttaaagatcttcaagac
gttcgcgggcattgggcactgttggaaaatggccagattgtggctcaggccgatatagca
aaactagcaacgccaccgcagcactctgaagaactcactattgatgctttgcgtcattac
ccgtttatctctgggcgcgaatatgcggtcaacttccgtttcttcaccaatcaagctgaa
gggctcattccccaacagcatgaagttgccaatgctcaaatcatcctgcatagcggctcg
caaacagtaaatgtgccggcctctaacgatattaaactccagcaagttggtgatagtgtc
aacatcagtgccggagatgcggctatggtttttgatagcaaatctggacgactcgtgagt
tatcaagtgtcaggcaaagagttgattaagtcaccgttggtgcccaatttctggcgggct
ttcactgataacgactacggtaacggctttgataaggtcatcccttattataaagaggcg
ggtgacaaggcagaagtgatctctgccaatgtggaaaaaaccgcgaatggcaccgctatg
cttaagtttgcgttgcgcttccccacgttaaacagcaacggcagcttaagttacactatc
ggcaaggatggcgcggtagcggtggattatcaggctcatctggcaaaggacttaccggaa
atgccaaggtttggcctgaaactgcaactgccagaaggttttgatcatgttaaatggtac
ggtcgcggcccttgggcgaattatcaggatcggaaagagagtgcctatctcgggatttat
gatgcggatgtcagcgaactgtacaccccgtatattcgaccacaggaaaacggtaatcgc
agtgatgtccgctggttggaaatccgtgatcaacaagggctagggctgcgtattagtggc
gcgccacagtttgattttactgcgcaccacaacaccattgctgattttgattatccgaaa
gatggccccaatcgccatacgacagacattgtgcctcggccgctgactgagctgtgtctc
gatctgcggcagcgcggtgtgggtggcgataacagttggggcgctgcaccctataaggct
tatcagatgttgcctgctgaacagcaagattaccgtttgcagttaacacttacgccgttg
catgcgcgctaa
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