Shewanella dokdonensis: KHX94_08585
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Entry
KHX94_08585 CDS
T07469
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00071
Fatty acid degradation
sdk00280
Valine, leucine and isoleucine degradation
sdk00310
Lysine degradation
sdk00362
Benzoate degradation
sdk00380
Tryptophan metabolism
sdk00410
beta-Alanine metabolism
sdk00640
Propanoate metabolism
sdk00650
Butanoate metabolism
sdk00907
Pinene, camphor and geraniol degradation
sdk00930
Caprolactam degradation
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01120
Microbial metabolism in diverse environments
sdk01200
Carbon metabolism
sdk01212
Fatty acid metabolism
Module
sdk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KHX94_08585 (fadB)
00650 Butanoate metabolism
KHX94_08585 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KHX94_08585 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KHX94_08585 (fadB)
00310 Lysine degradation
KHX94_08585 (fadB)
00380 Tryptophan metabolism
KHX94_08585 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KHX94_08585 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KHX94_08585 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KHX94_08585 (fadB)
00930 Caprolactam degradation
KHX94_08585 (fadB)
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KHX94_08585 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KHX94_08585 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KHX94_08585 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KHX94_08585 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QVK24496
LinkDB
All DBs
Position
1781659..1783809
Genome browser
AA seq
716 aa
AA seq
DB search
MIYKSNTIHVELLDSKIANLCFNSTGSVNKFDRETLTSLNEALDVIKATADIRGLVLTSA
KDNFIVGADITEFLALFAQEDEVLLSWLQLANSIFNKLEELPYPTAAAVNGYALGGGCEV
ILSTDFRIGDSSAKVGLPETKLGIIPGFGGTVRLPRLIGADNALEWITTGKEQRPEDALK
VGFFDAVTSPEHLQSVLLQMLEDAIAGKLDWQSKRKQKQQPLKLDKMEALMAFSTAKGMV
FAVAGKHYPAPMAAVGVIEQAANMARQQALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
SKAKKIIKAAHHIDQAAVLGAGIMGGGIAYQSASKGTPIVMKDINHKALELGLSEAAKLL
TAQLERGRSSPQKMAQVLNAITPALDYSAVKPANIVVEAVVENPKVKSTVLAEVEQVVAD
DAVIASNTSTISIDLLATSLKKPERFCGMHFFNPVHKMPLVEVIRGKNTADSTIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNALIADGADFAAVDKVMEKQFGWPMGPAYL
LDVVGMDTGHHAQAVMAQGFPERMATSAKDALQLMFAQNRLGQKNGAGFYRYSPDKKGKP
KKERDNAAYELLAAAFGPVKEFSADEIIARTMIPMINETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYVETMGLANYVAWADKYAHLGPLYQVTDAMRQLAAENGHYYQN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctataaaagtaatacaattcacgttgaactgcttgacagtaaaattgcaaatcta
tgttttaattcaacaggttctgttaataaatttgatcgagaaacgctgacatcactcaat
gaagcgctggatgttatcaaagcaactgccgacattcgtggccttgttctcacctcagct
aaagacaactttattgttggtgccgacattaccgagtttctggcattgttcgcgcaagaa
gatgaagtgcttttatcatggttgcagttagcgaacagcatttttaacaagctggaagag
ttgccttatccaacagcagctgcggttaacggctacgccttgggcggtggctgtgaagtt
atcttatcgacagatttccgcatcggcgatagctctgcaaaagtaggtttgccagaaact
aaactggggatcatcccaggttttggtggcacggtacggttaccgcggcttatcggcgcc
gataatgcgcttgagtggatcactacgggtaaagagcagcgcccagaggatgctctcaaa
gtaggattttttgatgccgttacttcccctgaacacctgcaaagtgtgttattgcaaatg
ttagaagatgccattgccggcaaactcgattggcaaagcaagcgcaaacagaaacaacaa
ccattgaaattggacaaaatggaagcattaatggccttttccaccgctaaggggatggtg
tttgcagttgcaggtaaacattatcccgccccaatggcggctgttggcgttattgagcag
gcagccaatatggcgcgtcaacaggcattgcaggtagaacatcaggcgttcataaaactc
gctaaaacagatgtggcgaaagcccttattggtattttcctcaacgaccaactcgtcaaa
agtaaagccaagaaaatcattaaggctgcccatcatattgaccaagccgccgttctaggg
gcaggaattatgggtggtggtatcgcttatcaaagtgccagcaaaggcacgcctatcgtg
atgaaagacattaaccataaagcgttggagttaggcctctcagaggcggccaaattactg
acagcacagttggaacgtggtcgttcatcgccgcagaaaatggcacaggtattaaatgcg
attacaccagcattggattattccgcagtcaagccagccaatattgttgttgaagcggtt
gtagaaaatcccaaagtgaagagtaccgtcttagcagaggttgaacaggtcgtggctgat
gatgccgttatcgcatccaatacttccacgatatctatcgacttgctggctaccagtctt
aagaaacctgagcggttctgcggtatgcatttcttcaatccggtgcataaaatgccgttg
gtagaggttattcgtggcaaaaacaccgccgacagcaccattgcaaccgtggtggcttat
gccagtaagatgggcaaaacaccgattgtagtgaacgactgccctggtttttttgtgaat
cgagtgctgttcccctattttgccggtttcaatgctttgattgctgatggtgctgatttt
gcggcggtcgataaagtcatggaaaaacagttcggttggccaatgggcccagcctatttg
cttgatgttgttggtatggatacggggcatcatgcacaagcagtgatggcgcaaggcttt
ccagaacggatggcgactagcgctaaagatgccctacaactgatgtttgcacaaaatcgc
ttagggcaaaaaaatggcgcaggtttctaccgctatagcccagataaaaaaggcaagccc
aaaaaggaacgggataatgcagcctatgaattgttagctgcggcttttggcccagtaaag
gaattcagtgctgatgaaattattgctagaaccatgatccccatgattaacgaaaccgtg
cgctgtttggaagaaggtatcattgcctctccggctgaagccgatatggggttggtgtat
ggcttgggctttcctccatttaggggtggcgtattccgctatgtagaaactatggggctc
gccaattatgtcgcttgggctgataaatatgcccatcttgggccgctgtatcaggtaact
gatgccatgcgacaacttgccgcagaaaacggccactattatcagaattga
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