Shewanella denitrificans: Sden_1162
Help
Entry
Sden_1162 CDS
T00344
Name
(GenBank) thiamine pyrophosphate enzyme-like TPP-binding
KO
K09459
phosphonopyruvate decarboxylase [EC:
4.1.1.82
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00440
Phosphonate and phosphinate metabolism
sdn00998
Biosynthesis of various antibiotics
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00440 Phosphonate and phosphinate metabolism
Sden_1162
09110 Biosynthesis of other secondary metabolites
00998 Biosynthesis of various antibiotics
Sden_1162
Enzymes [BR:
sdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.82 phosphonopyruvate decarboxylase
Sden_1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_C
TPP_enzyme_N
Tymo_coat
Motif
Other DBs
NCBI-ProteinID:
ABE54448
UniProt:
Q12Q28
LinkDB
All DBs
Position
1337058..1338170
Genome browser
AA seq
370 aa
AA seq
DB search
MKLQNITFWSSVPCSILNPLYNVFSRSDDIRSVTATSEGEAVGIASGAWLAGERAGVMMQ
NSGLGNAINPLTSLNIPFQIPLALMITWRGKPGMKDEPQHEFMGKITPSLLSLLEFGAEE
ISTDLVRLEQSFRTLAAQLDERKSHALLIPSGILSSQAFDVTPSNEIVTTSVQNFLDNRG
IPTRYKAIEACLDTLPELSAIIATTGKTGRELFTIGDQERFFYQVGSMGCASAIGLGVAL
NSKLPIVIFDGDGAALMKLGNLATIGNQSPENLIHIIFDNGVYDSTGGQFTHSQTTDFAE
IAKACGYCNVYRANSIEGLRKSVTNAVKESGPNLIHMKIAPGSLKNLARPTVSPSEVAFR
FRTFLTKHKL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactacaaaatataacgttttggagttcagtgccgtgctcaatattgaatccttta
tataacgtattttcccgaagtgatgatattagaagtgtcaccgcaacttcagaaggcgaa
gctgttggtatcgcaagtggagcatggctagcaggagaaagagctggagttatgatgcaa
aactctggtcttggaaatgctattaacccactgacatcacttaatattccttttcagatc
cctcttgctttaatgattacctggagagggaagccgggtatgaaggatgaacctcagcat
gagttcatggggaaaatcacgccttcgttgcttagtctattggagtttggtgcagaagaa
atttcaacggatttagtgagattagagcagagctttagaacgcttgcagcgcaattagat
gagcgtaagtctcacgctttgttaataccctctggtattttgtcttcgcaagcatttgat
gtcactccatcaaatgaaatagtgacaacttcagtacagaacttccttgataacagaggg
atacctacccgatacaaagctattgaagcttgtttggataccctgcctgaactatccgct
attattgccaccacaggcaaaaccgggcgggaacttttcactattggagatcaggaacgt
ttcttttatcaggttggatcaatggggtgtgcttctgctatcggattaggggtagcgttg
aactcaaaattaccgattgtcatttttgatggcgatggcgcagctcttatgaaactcggt
aatttggcgacgatcggtaatcaatcaccggaaaatctgattcacatcatttttgacaat
ggagtttacgattcaaccggggggcaatttactcactctcagacaactgattttgcggag
attgcaaaggcctgtggctattgtaacgtttaccgggctaattctattgaggggctgcgc
aagtcagttacgaacgctgttaaagaatctggccctaatttaatccatatgaaaattgca
ccgggtagcttaaaaaatctggcaagaccaacagtctctccatctgaagttgctttcaga
ttcaggacatttctaaccaaacacaagttatag
DBGET
integrated database retrieval system
