Shewanella denitrificans: Sden_2280
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Entry
Sden_2280 CDS
T00344
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00330
Arginine and proline metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
Module
sdn_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Sden_2280
Enzymes [BR:
sdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Sden_2280
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
ABE55560
UniProt:
Q12LW6
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Position
complement(2703707..2705617)
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AA seq
636 aa
AA seq
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MNDWTIEDARAGYNVTHWSQGFYGIGEAGEVTVSPDPLNPSNKVALDTLAQDLVQAGIAL
PVLVRFPQILHHRVESLCDAFNQAIQKYEYQNDYLLVYPIKVNQQKTVVEEILASQVSKE
VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKMS
ELKMVLEEARELGVTPRLGLRTRLAFQGKGKWQASGGEKSKFGLSAAQVLKVVDELKEAN
MLESLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRQLGASINCFDVGGGLAVDYDGTR
SQSNNSMNYGLTEYANNIVNVLTDLCNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA
YMPENIQAPAEDAPQLLHNMWQSWTEISGRHDQRAIIEIYHDSQSDIAEAHSLFAVGQLS
LMDRAWAEQTNLRVCHEVKGLLSNNNRYHRPVIDELNEKLADKLFVNFSLFQSLPDAWGI
DQVFPVLPLTCLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWDPANPYLIG
FFMVGAYQEILGDMHNLFGDTNSAVVFVEDNGKARIESTLDGDTVADVLRYVNLDADEFM
HTYEELVEQHIVEDERASILEELQLGLKGYTYLEDF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattggacaatcgaagatgcccgcgcaggctacaatgtgactcattggagccaa
ggcttttacggtatcggtgaagctggcgaggtgacagtatcgcccgatccattaaaccca
tccaacaaggtcgccttagatacactggcacaagatttggtccaagcaggtattgcctta
cctgtattagtgcgtttcccgcaaattttgcaccacagagtcgaaagcctgtgtgatgca
tttaaccaggccattcaaaaatacgagtatcaaaacgattacttattggtgtaccccatc
aaggtaaaccaacagaaaacggtagttgaagaaattctagccagccaagtctctaaagaa
gtacctcagctgggtttagaagcaggcagtaagcctgaattgatggcggtactcgccatg
gcacaaaaagccagctcagtaatcgtctgtaatggttacaaagataaagaatacgttcgt
ttagccttaattggtgaaaagctaggccataaagtttacatcgtacttgagaagatgtct
gagcttaaaatggtgcttgaagaagcccgtgagcttggcgtcactccccgtcttggttta
cgcacccgtcttgcattccaaggcaaaggtaaatggcaagccagtggcggcgaaaaatct
aagtttggcctttctgcagcccaagtgcttaaagtagttgatgagctgaaagaagccaac
atgttggagtctttacagttattgcatttccacttaggttctcaaattgccaacattcgt
gatattcgccaaggtgtgagtgaagcgggccgtttctattgtgagttacgtcaactgggt
gccagcattaactgtttcgatgtcggcggcggcttagcggttgactatgatggcactcgc
agtcaaagcaataactcgatgaactacggtttaaccgagtacgccaataatatcgttaac
gtgttaacggatttgtgtaacgaatacgagcagccaatgccacgtattatttctgaatct
ggtcgtcacttgactgcgcaccacgcagtgttaatcactgacgtgattggcactgaagcc
tatatgcctgaaaatattcaagcaccagccgaagatgcgccgcaactattacataacatg
tggcagtcttggacagagatcagcggtcgtcacgatcaacgtgcaattattgaaatttat
cacgatagccaaagcgatatcgccgaagcgcattctttgtttgccgtcgggcaattaagc
ctgatggatagagcctgggctgagcaaaccaacttacgtgtctgtcatgaagtaaaaggt
ttgctaagcaataacaaccgttaccacagaccggtgattgatgaattaaacgaaaaatta
gctgacaagctattcgttaacttctcattattccagtcattgccagatgcatggggtatc
gaccaagtattcccagtattgccactgacttgccttgataaagcgccagagcgccgtgca
gtaatgctagatatcacttgtgactccgacggtattgtcgatcaatacgtagatggtcaa
ggtatcgagacgacattgccagtacccgcatgggatcctgctaacccgtacctgattggc
ttcttcatggtgggtgcataccaagaaatcttgggcgacatgcataacctctttggtgac
actaattcggctgtggtatttgttgaagataacggtaaagcacgaattgagtcgacgtta
gacggtgacactgtggctgacgttctgcgttacgttaacttagatgctgatgagtttatg
catacctatgaagaattagttgaacagcacattgttgaagacgaacgtgcttcaatttta
gaagagttacaacttggacttaaaggttacacttacttagaagatttctaa
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