Sphingomonas donggukensis: M9980_11035
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Entry
M9980_11035 CDS
T08944
Name
(GenBank) class III extradiol dioxygenase subunit beta
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00362
Benzoate degradation
sdon00627
Aminobenzoate degradation
sdon01100
Metabolic pathways
sdon01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M9980_11035
00627 Aminobenzoate degradation
M9980_11035
00624 Polycyclic aromatic hydrocarbon degradation
M9980_11035
Enzymes [BR:
sdon01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
M9980_11035
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
URW75089
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All DBs
Position
complement(2251911..2252759)
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AA seq
282 aa
AA seq
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MARITAGIATSHIPAVGAALDNGKTGDTYWQPVFAGYDWTRRFEEEEKPDVVILVYNDHA
SAFDMKFIPTFAIGCGEEFAPADEGWGPRAVPVAQGHPDLAWHIAQSLILDEFDMTIINE
MDVDHGLTVPLSLLFGQPDAWPVKVIPLAVNVVTYPPPSGNRCWSLGEAIARAVASFDED
LNVQIWGTGGMSHQLQGQRAGLINKPWDTAFLDALTADPDMLRAKPHIEYLREAGSEGIE
LVMWLIMRGALGANVQELHRFYHVPASNTAVGHIVLRPETTP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcatcaccgccggcatcgccaccagtcatattcccgctgtgggtgccgcgttg
gacaacggcaagaccggagacacctattggcagccggtcttcgcgggatacgactggaca
cggcgtttcgaggaggaggaaaagccggatgtcgtgatactggtgtacaacgaccatgca
tcggcgttcgacatgaagttcattccgaccttcgcgatcggctgcggcgaggagtttgcg
ccggcggatgagggttggggcccgcgcgccgtaccggtagcgcaaggacacccggacctc
gcgtggcatatcgcgcaaagcttgatcctcgacgaattcgacatgacgatcatcaacgaa
atggacgtcgatcacggtctgaccgtgcccttgtcgctgttgttcgggcagcctgatgca
tggccggtgaaggtgatcccgctggcggtgaacgtcgtcacctacccgccgccatcgggc
aatcgctgctggtcgctcggggaagcgatcgcgcgtgcggtggccagtttcgacgaggat
ctcaacgtccagatctggggcacgggcggcatgagccatcagcttcaggggcagcgcgcg
gggctcatcaacaagccgtgggataccgctttcctcgacgcgctcaccgccgatcccgac
atgctgcgcgccaagccacacatagaatatctgcgcgaggccggcagcgaggggatcgag
ctggtcatgtggctgatcatgcgcggcgcgctcggcgcgaacgtgcaggaactgcaccgc
ttctaccacgtgccggccagcaacaccgcggtcggccacatcgtcctgcgtccggagaca
acgccatga
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