Seriola dumerili (greater amberjack): 111220543 Help Entry 111220543         CDS       T05606                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sdu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     111220543 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sdu03400]     111220543 (msh6) DNA repair and recombination proteins [BR:sdu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      111220543 (msh6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  111220543 NCBI-ProteinID:  XP_022599351 LinkDB All DBs Position Unknown AA seq 1383 aa AA seqDB search MAKQSSLFNFFTKSPPPVSKPKPSPSPTEADLPSSVEKSNSSPKEQAKQTPQQQPAKTSK VKPKSDSKSAKGGFKKLFGDKAPTTKESNPTSSLPFSAGALVWAKLEGHPWWPCMVVPQP LTGQQMRGRGRDQRIHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRH AMELADGVMFDSPEKRLKIPLCTDPSDEEEDDEEMELDKSTLTDEELTDEDLQKNEEVKS SKVSRRSSRASTEKSNKAKRRRIIVASDSDGSDEEFKPEQAASSSEDEEEEGTVSSEEEE EDSTQESEVESPVKPAKRKRPEEKPANAKAKVSTTLSAAPKRAPPAVAADTKSRLSAFSA PDSFESQANGSGSSGGTTVWDHEKLEWLQDGRRKDRRRRRQTEDDYDPSTLYVPEDFLNR VTPGMRRWWQLKSEMFDTVIFYKVGKFYELYHMDAVIGVNELALTFMKGTWAHSGFPEIG FARFSDVLVQKGYKVARVEQTETPDMMEARCKTMAKPTKFDRVVRREVCRIITRGTQTYS VLDGAPSESQSKFLLSLKEKAEEESSGRCRTYGVSFVDTSVGYFHVGQFPDDRHCSRLRT LIAHFAPAEVLFERGNPSVETRKILKASLSSALQEGLNAGTQFWDAQKTLKTLSEEDYFK DTTGKKQETGNNPLPPLLKKMTSESDSLCLTPKEGYELALSALGGSIFYLKKCLVDQELL SMANFEEYVPVDVEMEKAAGPASFFAQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERL DTCSTPFGKRLLKQWLCAPLCNPTSIKDRLDAVEDLMGAQAQATEVSDLLKKLPDLERLL SKIHSIGTPLKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISVLAPVSGEF CSTLLRQVISLKSEKDGLFPDLSAELRRWETAFDHQKARTTGVITPKAGFDPEYDQALTG VKNCERELQVYLDRQKKRLGCKNMAYWGTGRNRFQMEVPDSVSERNIPEEYEVKSTKKGW KRYVTKESEQLFSELQGFEEKRDAALKDCMRRLFYNFDKNYSNWKTGVECMAVLDVLLAL SRYSQGGDGPMTRPQVVLPEGDDQVATFVDLTGSRHPCVTKTFFGDDFIPNDIFIGCPGS GETDEGKGHALCVLVTGPNMGGKSTLMRQCGLVIIIAQLGCYVPAESLRFTPVDRVFTRL GASDRIMAGESTFFVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVKELAE KICCRTLFSTHYHSLVEDYANNPAVRLGHMACMVENECEDPSQETITFLYKFITGACPKS YGFNAARLASLPEDVIQSGHRKAREFEKNTVSLRLFKKLCQFAEDATLDNTHFASLVLML DNM NT seq 4152 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagctctcttttcaatttctttaccaagtctccgccgccggtctccaaa ccgaagcctagtccctctccgaccgaggcagacctgccgtcctccgtggagaagtccaac tcttctccgaaagagcaagctaaacagacaccacaacaacaaccggccaagaccagtaaa gtaaagccaaaaagtgattccaaatccgccaaaggggggttcaagaaactgtttggcgac aaggctccaacaaccaaagaaagcaatcccacatcttcactgccattcagtgccggtgcc cttgtgtgggcaaaactggagggacacccctggtggccatgcatggtggtaccccaacct ctgactggacagcagatgagaggccgcggtcgagaccaacgcatacatgtccatttcttt gatgaacctcctactaggggatgggtcagcaccaaatatatccgagagtaccaaggctcc gacagcagcgatgctaaaaccggcggggtgttcttcagcgggaagcctgtaatccgccat gcaatggagcttgctgatggagtcatgtttgacagcccagaaaaaagattgaagataccc ctctgcacagacccatcagatgaggaagaggatgatgaagaaatggagcttgacaagtcg acactgactgatgaagagctcactgatgaggatctccagaaaaatgaggaagtgaagtca tccaaagtcagtcgccgttcatcccgtgcgtcaacagaaaagagcaacaaggccaagcgc cgtcgcattattgtagcctcggacagtgatggttcagatgaggaattcaaaccagaacag gctgcatccagcagtgaggatgaagaggaagaaggaacggtcagtagtgaagaggaggaa gaggatagcacacaagagtcagaagtagaaagccccgtcaagcctgcaaagcgcaaacgt cctgaagaaaagcctgctaatgcaaaagccaaagtatccaccacactgtctgctgcaccg aaacgagctccaccagctgtcgcagccgacacaaagtctcgcctctcagccttctctgcc cctgacagctttgagagccaggcaaatggttcaggctccagtggaggtacaacagtttgg gaccatgagaagctggagtggttgcaggatggcaggaggaaagacagaagaaggcggcga cagacagaggatgactacgatccttccacactgtatgtgcctgaggattttctaaacaga gtcactcctggtatgcgtcggtggtggcagctcaaatcggagatgtttgatacagtgatt ttctacaaggtggggaagttttatgagctctaccacatggatgctgtgattggagtcaac gagctggcgctgactttcatgaaggggacctgggcgcactcgggctttccagagatcggc tttgcgcgtttctcagacgttctggtccagaaaggctacaaggtggctcgagtggagcag acggagaccccagatatgatggaagcacgctgtaagaccatggctaaacccacaaaattt gaccgtgtggtgagaagagaggtgtgccggattatcacacgtggtacccaaacgtacagt gtgttagacggtgctccttcagagagccagagcaagttcctgctgagtttaaaggaaaag gctgaagaggaaagctctggccgctgccgcacctacggtgtcagctttgtagacacgtca gtgggttattttcatgtcggtcagttcccagacgatcgtcactgctcacgcctgcgcacc ctgatagcacactttgctcccgctgaggtgctctttgaaagggggaacccatctgttgaa acacgcaagatactcaaggcctctctgtcttctgctctgcaagaagggcttaatgcgggg acacagttctgggacgcgcagaagactcttaaaaccctctcagaggaagactactttaaa gataccactggcaagaagcaggagactggaaacaatcctcttcctcctcttctaaaaaag atgacctctgagagtgattcactgtgccttactcctaaggagggctatgagctggcactg tcagcactgggtggaagcatcttctacctgaagaagtgtctggtagaccaagagctgctc tccatggccaactttgaagaatatgtccctgttgatgtagagatggagaaagctgctgga cctgccagtttcttcgcccagactcgtcagcgaatggtcctggatggagtgactctggca aacttggaaatctttcagaatgggtcaggaggaacagaggggacgctgctggagcgcttg gacacgtgctctaccccgtttggtaagaggctgctgaagcagtggctctgtgctcctctg tgtaaccccacatccatcaaggacagactggatgcggtggaggacctgatgggagcccag gcccaggctacagaggtttcagacctgctgaagaagcttccagatttggagcgtctcctc agtaaaatccacagcattggcactcctctgaagggccaggaccaccctgatagcagagca gttctctacgaggaggtcacctacagcaaacgcaagatagcagacttcctctcagcactg gaaggtttcaaaactatgcaggagatcatttctgtcctcgctccagtttcaggcgaattt tgctccacgttgctccgccaagtcatcagtctgaaaagtgaaaaggatggcctctttccc gacctctcggctgaactcaggcgctgggagacggcttttgaccaccagaaagcccgcact actggtgtcatcaccccaaaagctggctttgaccccgagtacgaccaggctctgactggg gtcaagaactgtgagcgagagctgcaggtttacctggacagacagaagaagagactcggc tgtaaaaacatggcttactggggaactgggcgaaaccgcttccagatggaggtgcctgac agcgtctcggagaggaatattcctgaggagtacgaagtgaaatctacaaagaaaggctgg aagcgttacgtaacaaaggagagtgagcagctgttctcagagctgcaaggatttgaggag aagagggatgctgcacttaaagactgcatgaggagactgttctacaacttcgacaagaac tacagcaactggaagactggtgtggagtgtatggcagtgcttgatgtactgctggccttg tcacgctacagtcagggtggagacggaccgatgacccggccacaggtggtgctccctgag ggtgacgaccaggtagcgaccttcgttgacctcactggatcccgacacccctgtgtcacc aagaccttctttggcgatgacttcattcctaatgacatcttcattggctgccctggtagt ggtgaaactgatgagggtaaaggtcacgccttgtgtgtccttgtcacagggccaaacatg ggtggaaagtccactctcatgagacagtgtggacttgtgatcatcattgctcagctgggt tgctatgttcctgccgagagcctgcgcttcacaccagttgacagggtcttcacccggctg ggagcctcagatcgtattatggctggagagagtaccttctttgtggagctaagcgagact gccagcatcctgcaccatgccactaaacactcgctcgtgctcctggatgaattaggaagg ggcacagccacatatgatggcacagcgattgccagtgctgttgtgaaggagcttgctgag aaaatctgctgtcgcacccttttctccacacattaccactccctggtggaggactacgcc aacaaccctgctgtgcggttgggccacatggcgtgcatggtggagaatgaatgtgaggat ccaagtcaagaaaccatcacattcctctacaagttcatcacaggtgcttgtccaaagagt tacggcttcaatgcagctcgactcgccagcctgccagaggatgtcatccaatcaggacac aggaaggccagagagtttgagaagaacaccgtcagcctaagactgttcaagaaactctgc cagtttgctgaagatgccacactggacaacacacactttgcttcacttgttctgatgctc gacaacatgtag

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