Seriola dumerili (greater amberjack): 111223739
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Entry
111223739 CDS
T05606
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04020
Calcium signaling pathway
sdu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111223739
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111223739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111223739
Ion channels [BR:
sdu04040
]
Ligand-gated channels
Glutamate (ionotropic)
111223739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
111223739
NCBI-ProteinID:
XP_022603721
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MNETDPKSIIKSICDLMTEHWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSM
IMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVTKVRSTIEN
SFVGWELEEVLLLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEANTIFEVAHSVGITGY
GYTWIVPSLVAGDTDVVPAEFPTGLLSVSYDEWDYGLEARVRDGVAIITMATSTMMMDRG
PHTLLKSECHGAPDKKTPISGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNK
ERQWDRVGKWENGSLSMKYHVWPRYELYGGAANREDDHLSIVTLEEAPFVIVEDVDPLSG
TCMRNTVPCRKQIKTLNQTKESGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHG
KKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSP
SAFLEPFSADVWVMMFVMLLLVSAVAVFIFEYFSPVGYNRCLADGKEPHGPSFTIGKAIW
LLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLS
DKKFQSPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMTKFHQRNVNEALQSLKAGKLD
AFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILQLFGDG
EMEELESLWLTGICHHEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLR
FCFMGVCSGQPGFVFSISRGIYSCIHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAK
NMASLSGVNGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKAPYLPEDNMFSDYISEVE
RTFGNLHLKDSNLYQDHYLHHHGSTLGLSGPPANRPHSLGSASSLEGGMFDCDSLGGGVA
PIFTTQPCSALTHRNMSKFDLLSGQTPPSGQSFKGGLPDLYGKFSFKGGASSSTFIPGHG
YCGGRGDDDGNIRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIE
LGYRRKPYHISHHHYHSHRSTSPPLLPADRKRGGGGGGGGNNDGNSYIFREKESVRDFYL
DQFRPKEGVPQWEHVDLTDGPGNRDGGVGACTTLVPVDDFLKSKPKKSDSKSGGGSGLAG
GEWECRNCRASGGGGGKQMSMHGGGGGGYGGGMSCGTSGGGGNSRPSSATCMRCEGCKKT
GNLYDISEDNNHLLEQMGGGKGGGGGGGMGAGPQSQSQAQQRRKSGGFGKPLRRQHSYDT
FVDLQKEESGGMGSLMGGLGGGGGMSGPGMGGMLPPPRSVSLKEKERYMEGTSPFAHIFE
RHGGSERERERDRDPLFYGGEGRKGPGSPFGLFRGGDGLHRRSIGERDIRDRDRSLMEGG
GGAAFSLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQYYMKKQQHTTSYLPASATAGVMS
NVAPRFPKELSLGGMNHHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagacggaccctaaaagtatcatcaagagcatctgtgacctaatgaccgagcac
tggctgcagggcgtggtgtttggggacgacaccgaccaggaggccatcgcccagatcctg
gacttcatctcagcccagacccacatccccatcctcggagtccgcgggggctcctccatg
atcatggctgccaaggatgacaactccatgttctttcagttcggcccctccatcgagcag
caggcttcggtcatgctgaacatcatggaggaatacgactggtacatcttctccatcgtc
accacctactacccgggttaccaggactttgtcaccaaggtccgtagcaccatcgagaac
agctttgtgggctgggaactggaagaagttttactacttgacatgtccgttgatgacgga
gattcgaagatccagaaccagctgaagaagctccagagtcctgtcatccttctctactgc
acaaaagaggaggccaacaccatcttcgaggtggcccactctgttgggatcactggctac
ggctacacgtggatagtgccctcgctggtagctggagacaccgatgtcgtgcccgcggag
ttccccacaggcctgctctccgtgtcctacgacgagtgggactacggcttagaggcccgc
gtccgcgacggcgtggcgatcatcactatggccacctccaccatgatgatggaccgcgga
cctcacaccctgctcaagtctgagtgccacggagctcctgacaagaagacccccatctca
ggcaaccccaacgaagtgctcaggtacctgatgaatgtgacgtttgagggacgtaatctg
tcgttcagcgaggacggataccagatgcaccccaagctggtcatcattctgctcaacaag
gagagacagtgggacagggtgggtaaatgggagaatggctccctgtctatgaagtaccat
gtgtggcctcgctatgaactgtacggtggggcagcaaacagggaggatgaccacctgtcc
atcgtgacattggaggaggctccgttcgtcattgtggaggacgtggatccgctcagcggg
acctgcatgaggaacactgttccctgccggaaacagatcaagacactcaatcagacgaag
gagtcggggatctacatcaagcgctgctgtaaaggtttctgcatcgacatcttgaagaag
atcgccaagactgtcaagttcacctatgacctgtacctggtcacgaacggcaaacatggc
aagaagatcaatggcacctggaatggcatggtgggcgaggtggtgttaaagaacgcccac
atggccgtcggctctttgaccatcaacgaggagaggtcggaggtcatcgacttttccgtc
cctttcatcgagacgggcatcagcgtcatggtctcccgtagcaacggcaccgtctcgccc
tcggccttcttagagcccttcagtgcggatgtgtgggtgatgatgtttgtgatgctgttg
ctggtgtcagcagtggctgtgtttatattcgagtacttcagccctgtgggctacaaccgc
tgtctggctgacggcaaagagcctcacggtccatccttcaccatcggtaaagccatctgg
ctgctgtggggtctggtcttcaacaactctgtgccggtgcagaatcccaaaggcaccacc
agtaagatcatggtgtcagtgtgggccttctttgctgtcatcttcctggcctcttacact
gccaacctggccgctttcatgatccaggaggaatacgtggaccaggtgtctggtctctca
gacaaaaagttccagagtccgaatgacttctcgcctccttttcggttcggcactgtccca
aatgggagcacggagaggaacattaggaacaactacccagaaatgcactcctacatgacc
aagttccaccagagaaacgtcaacgaggctctgcagagtctcaaggccggcaaactagac
gctttcatttatgatgcagccgtactgaactacatggctggcagggacgagggctgcaag
ctggtgaccattggcagcggctacatcttcgccaccacgggttatggcatcgccatccag
aaggagtcactctggaagagacatgtggacctggccatcctgcagctctttggagacggt
gagatggaggagctggagtccctgtggctgacggggatctgccaccacgagaagaacgag
gtgatgtccagccagctggacgtggacaacatggccggcgtcttctacatgctcggcgcg
gccatggctctgtcgctcatcaccttcatctgtgaacactggttctactggcagcttcgc
ttctgcttcatgggcgtgtgctcgggccagcccggcttcgtcttcagcatcagcaggggc
atctacagctgtatccacggggtgcagattgaggagaagagcagctcggcgctgaactcc
ccgtcggccaccatgaacaacacccattccaacatcatgcgcctcctacgcaccgccaag
aacatggcgtccctgtccggggtgaacggctcgccgcacagcgcgctggacttcatccga
cgcgaatcctccgtttacgatatctccgaacaccgccgcagcctggcgggccactcggac
tgcaaggctccgtacctaccagaagacaacatgttcagtgactacatcagtgaggtggag
aggacgtttggcaacctccacctgaaggacagtaatctgtaccaggaccactacctgcac
caccacggctcaacgctggggctcagtggacctcctgccaaccggccccatagtttgggc
agcgctagctctctggagggcggcatgttcgactgtgacagcctgggtggaggggtggct
cctattttcaccacccagccctgctcagcactgacccacaggaacatgagcaagtttgac
ctcctgtccggacagactcctccctccggccagagcttcaagggaggcctgccagacctg
tacgggaagttctcttttaaaggaggcgcctcgagttccaccttcatccctgggcatggt
tactgtggagggagaggagacgacgatgggaatatacgctccgacgtctctgacatttcc
acgcacacggtcacttacggaaacctggagggcaacgccaagaagcgcaaacagtaccga
gatagcctgaagaagaggccggcctctgccaagtccagacgggagctggacgagattgag
ctgggctacaggaggaaaccctaccacatcagccaccaccactaccacagccaccgctcc
acctccccgccacttctgcccgctgaccgcaagagaggaggaggaggaggtggaggagga
aacaacgacgggaactcctatatcttcagagaaaaggagagcgttagggatttttatttg
gaccagtttcggcccaaagagggcgtccctcagtgggagcatgtggacctgacagacggc
cccgggaacagagacgggggtgtgggggcctgcaccaccctggttccagtggatgacttt
cttaagagcaaacccaaaaagtccgattcaaagagcgggggaggatctgggctggcgggg
ggagagtgggagtgcagaaactgtcgggctagcggcggaggagggggcaagcagatgtcc
atgcatggagggggtggcggcgggtatggtggtggtatgagctgcgggacctcgggaggc
ggaggaaacagccgccccagctctgccacctgcatgcgctgcgagggctgtaaaaagaca
ggaaacctctatgatatcagcgaggacaacaaccacctcttggaacagatggggggaggc
aaaggtgggggaggaggaggaggtatgggcgcaggccctcagtctcaatctcaggcccag
cagaggaggaagagcggaggattcggcaagccacttaggcggcagcactcctatgacaca
tttgtcgaccttcagaaagaggagtcaggtgggatgggaagtttgatggggggtctagga
ggaggcggagggatgagcggtccaggtatgggagggatgctgcccccacccaggagtgta
agcttgaaggagaaagaacgctacatggagggcaccagccccttcgcacacatatttgag
cgccacgggggctcggagagagagagggaaagagacagggacccgttgttttatggaggt
gagggccggaaaggacccggctcgccatttggtctgtttagaggcggagacggcctccac
cgccgctccatcggagagagagacattagagacagggacaggtctttgatggaaggagga
ggtggggcagcgttctctttatccaaatccctttaccccgaccgggtaaaccaaaacccc
tttatacccacctttggggacgaccagtgtctgatgcacggagccaaacagtattacatg
aaaaagcaacagcacacgacgtcatacctgccagcgtctgccacggctggggtgatgtcc
aacgtagccccccggttcccaaaagagctcagcctcggtggaatgaaccaccacggctcc
atgttgggggtcggccccccacgtcccttcaatggaagcaatggccatgtgtacgagaaa
ctctccagcattgagtctgacgtgtga
DBGET
integrated database retrieval system
