Seriola dumerili (greater amberjack): 111230127
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Entry
111230127 CDS
T05606
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00310
Lysine degradation
sdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111230127 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111230127 (setdb1)
Enzymes [BR:
sdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
111230127 (setdb1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111230127 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
111230127 (setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
111230127
NCBI-ProteinID:
XP_022612443
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MESSEGMEVEGWDSSLEEELGVSLDELKKWIEEAVEKSEIVQKKKAQLTELKKWVEQKEK
DEAMTEMLLSDASQSIVECEKLVKATYQKNGLVYRESSSEDEGGGGGVLSSEVIEIDDDD
DDDVIAVGCLVPPKKPVTTSKDPVLKEASAALQKTSHQVQKLVQMVNKPSPGTQLLRSPG
HPPSQSGIQGSVPAVFVSQVSSQSMAQPNPNMAEDELRVGMSILGKKRTKTWHRGTLVAI
NPVGNGIFKYKVKFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVTLPELYPVCRPLKRTWEDIEDGSCRDFIEEYITAYP
SRPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNL
KMTTANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGHVGASPAKTPQATLSQPSQTPQ
NQQHQQHQQRPQPPQPQQTQQTQQSPQPVHPVQPPRVDNKHQMAKKSTSPFVPGVGGTHA
SKVMQALSPSPSNLPGIRLLNAPNTPMPTFTQSYQRQLPTLAPAPPSMTHAMATIPHQPS
YRAPTDRIFYLAHTCQPACLNRIRPAKADMHRGKNPLLTPLLYDFRRMTGRRKVNRKMSF
HVIYKAPCGLCLRNMAEIQHYLFQTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYIPDIT
GGKEDIPLSCVNEIDSTPPPKVDYSKERIPEDGVFINTSSDFLVGCDCTDGCRDKSKCSC
HQLTLQATGCTPGGQINPNAGFLHKRLEECLPTGIYECNKRCKCCVQMCTNRLVQHGLQV
RLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESV
ENFKEGYESEAHCSDSEGSGVDVSRIKIQPSALVSSNPVGRPPRKGESKSKAQSSSSSDD
SNDDDDKDSKSEDESDSSDDTFVKENYYSSSSVWRSYTTRGQVKGNKEGSQDSKDGLSAS
ARGTDDEKPPSIPEETGKSKVASWLTSQGLKKESGDSKSPVKPETGKKQDVMTLSDSDDV
QTISSGSEDNKEREKVTPGVTKKQVAVKSTRGIALKTSHGLMVKTGAPGGVGGPGGQGGK
TGQQGQTGGGAENTPKNTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDT
HDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagtgaggggatggaggtggagggctgggactccagtctggaggaagaattg
ggcgtttctctggatgagctgaagaagtggattgaagaggctgtggagaagagcgagatt
gtgcagaagaaaaaggctcagctgacagagctcaaaaaatgggtggagcagaaagagaag
gatgaggcgatgacagagatgcttctcagtgatgccagccagtccatagtggagtgtgag
aagctggtaaaggcaacctaccaaaagaatggtcttgtttaccgggagagcagctcagag
gatgagggcggtggaggaggggtgttgtcctctgaggttattgaaatagacgacgatgat
gacgatgatgtcattgctgttggctgtttggttcctccaaagaagcctgtcactacaagc
aaagatccagtgttaaaagaggcctctgcagctctacagaaaacctctcatcaggtgcag
aagttggtccaaatggtcaacaagccttcaccaggtactcaattgcttcgatctccagga
caccctccatcccagtcaggtattcagggttctgttccagcagtgtttgtgtcacaggtt
tcatctcagtccatggcccagccaaacccaaatatggcagaggatgagctcagagtcggg
atgagcattctgggaaagaaacgcaccaagacctggcacagaggcaccctcgttgctatc
aaccctgttggaaatggtatattcaagtataaagtgaagtttgataaaggaaagagtctg
ctgtctggaaatcatgtggctttcgactataaccccaccctggagagtctgtatgtcgga
gcccgtgtagtggccaagtacaaggacggaaacctggtgtggctctatgctggaatagta
gcagaaatgccgaacaacaaaaaccgcatgaggtttctaatattctttgatgatggttat
gcttcatatgtgacactacctgagctctaccctgtttgccgaccattaaagcgaacttgg
gaagacatagaggacggatcatgtcgagacttcatcgaggagtacatcacagcctacccc
agcaggcctatggtgctcttaaaggtcggccagataatcaagacagagtgggagggaacc
tggtggaagagcaaagtggaggaggtggatggcagcttggtcaagatcctcttcttggat
gataagaggagtgagtggatctatagaggctccaccaggttggagccaatgttcaacctg
aagatgaccacagccaacactcaggagaagaagctggctggccagcagaggacaagacct
aatatgggggcgttgaggagtaaaggcccagtggttcaatacacaagtgacggacatgtt
ggagcttctcctgccaaaacgccgcaggccacactgagccagccttcacagacaccacaa
aatcaacaacatcaacaacatcaacagcgtccacaacccccacagccccaacaaacacaa
caaacccaacaaagccctcagcctgtacatcctgtacaacctccacgtgtcgacaataaa
catcagatggcgaagaagagtacttctccgtttgtccctggcgtaggaggcacacatgcc
tctaaagtcatgcaggctctttcccccagtcccagcaacctgccgggtataagattgttg
aatgccccaaatactcctatgcccactttcacacaatcgtatcaaagacagctgccaact
ctggctcctgccccgccttccatgacccacgcaatggccacaatcccccatcagccctcc
tatcgcgccccgacggaccgcatcttctacctggctcacacgtgtcagcctgcctgcttg
aatcgtatccgacctgctaaagctgacatgcacagaggaaaaaaccccctcctcacaccg
ttactgtacgatttcaggcgcatgactggacgacgcaaagtcaaccgcaagatgtccttc
cacgtgatttacaaggctccatgtggactctgtctgcgtaatatggcagagatccagcac
tacctcttccagacgcgctgtgactttatattcttagagatgttctgtctagacccctac
gtacttgtggaccggcccttccagccacagaggccgttctattacattccagacatcact
ggtggaaaggaggacatcccactttcctgtgtcaatgagattgattccaccccgcctcct
aaagtagactacagtaaagagcgtattcctgaagatggagtattcatcaacaccagttca
gacttcctagttgggtgtgattgtactgacggctgtcgagacaagtccaaatgttcgtgc
caccagctgacccttcaggctacaggttgtacaccgggggggcagatcaacccaaatgcc
ggatttttgcacaaacgattagaggagtgccttcccacaggaatctacgagtgcaataag
cgatgcaaatgttgtgttcagatgtgcaccaaccggcttgttcagcacggcctgcaggtg
cgtctccagctcttcaagacccagaacaaaggatggggcatccgctgtctggatgatgtg
gcgaagggctcttttgtctgcatctatgctggtaaaatcttgacggacgactttgcagac
aaagagggtttagaaatgggtgacgagtattttgctaatctggatcatatagagagtgtg
gaaaacttcaaggagggctatgagagcgaggctcactgttcggacagtgagggaagcggt
gtggacgtttccaggataaaaatccaaccatctgctttagtatcatctaaccctgtgggg
cgaccgcccaggaagggtgagtccaaatccaaagcccaaagctcaagctcatcagacgac
agcaatgacgacgatgacaaagactcgaagagtgaagatgaaagcgacagttcagatgac
acgtttgttaaggagaactactacagctccagctctgtgtggaggagttacaccacacgt
ggtcaggtcaagggcaacaaggaagggagtcaagacagtaaagatggactgagtgcctca
gccaggggaaccgatgacgagaagccaccgtccataccagaggaaacggggaaaagcaaa
gtggcttcctggttaacaagccaggggctgaagaaggaatccggagacagcaagagtcca
gtgaagccagaaacggggaagaagcaggatgtgatgactctctctgacagcgatgatgtt
cagaccatcagctctggatctgaagacaacaaggagagagaaaaagtcaccccaggtgtg
actaagaagcaggtagcagttaaatctacacgtggcattgccctgaagaccagccatggt
cttatggtaaaaacaggtgcacctggaggtgtgggtgggccgggtggtcagggaggaaaa
acagggcagcagggacagactggaggaggcgcggaaaacactcccaaaaacacccgccag
ttctttgacggggaagagtcgtgctacatcatcgatgccaagttagaaggaaaccttggg
cgttacctgaatcacagctgtagtcctaacctttttgtccagaatgtgtttgtggacaca
catgatttgcgattcccctgggtggcattctttgccagcaagcgaatccgggccggcaca
gagctgacctgggactacaactatgaggtgggcagtgtggagggtaaagtgctgctctgc
tgctgtggatccaccgagtgcagaggaaggctactgtga
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