Seriola dumerili (greater amberjack): 111231538
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Entry
111231538 CDS
T05606
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04020
Calcium signaling pathway
sdu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111231538
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111231538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111231538
Ion channels [BR:
sdu04040
]
Ligand-gated channels
Glutamate (ionotropic)
111231538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
111231538
NCBI-ProteinID:
XP_022614394
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MLVSLHPSPSRLQDKRFVSPASSPHHPPPPPHPPQDHSLHPYPQPRLTLPFLSLSFSLLL
LSILLLPVCESRRGGGPGTGPGGAPGGQGGQRGGGTQRGVVIPPQYSPGSPVLPPINPKL
INSLSIAVILVGNSSEVALGAGLEKEDFLHIPYPPKVEVVTMNETDPKSIINRICAQMTR
NSLQGVVFGDDTDQEAIAQILDFISAQTHLPILGIRGGSSMVMAAKDDHSMFFQFGPSIE
QQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIENSFVGWELEEVLLLDMSVDD
GDSKIQNQMKKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVAGDADHVPS
VFPTGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLLKSSCLGTPDKKGSN
TGHSKEILKYIMNVTFEGRNLSFSEEGHQMFPKLVIILLDKDRQWDRVGKWERGSLTMRY
HVWPRFELYSAAEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLSNQTG
DSGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVLKNAH
MAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLL
MVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTT
SKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNEFSPPFRFGTVP
NGSTERNIRNNYRDMHAYMTSFHQKNVDEALYSLKTGKLDAFIYDAAVLNYMAGRDEGCK
LVTIGSGKVFASTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEELEALWLTGICHNEKNE
VMSSQLDVDNMAGVFYMLGAAMVLSFITFICEHLFYWQLRFCFMGVCSGKPGVTFSISRG
IYSCIHGVQIEENKSTIDSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGINGSPHAALE
YSHSGRESAIYDIQEHRRSLVGHPVDCKSAPPYMPEDNMFSDYISEVERTFGNLPLKDSN
LYQDHYRHHHPASALGMSGPPPNRPRSLGSASSLEGGMFDCDSLGGGVAPIFTTQPRPSM
THRNTNKFDLIAGHTPADSNQGGFKGNNVYGRFSFKGGASSTGLIGGHDRYCGGGGGGSG
GDDGNIRSDVSDISTHTVTYGNLEGNAKRRKQYRDSLKKRPASAKCRREQDEIELSGLRR
RPHHHTVHHHFPHGPLAHRTVSPPLERKRGGGGDKVNQNPFIPTFGDDQCLLHGAKPYYI
KKPQTQQQQQQQQLLNNSRGGGDFRGSMGATSYLPASATAGVISNVAPRFPKELCLGGVG
GPMGNHHGGNKLLPGGRDTLGLGQGQRPFNGASNGHVYEKLSSIESDV
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcagcctccacccttctccctcccgtcttcaggacaagcgcttcgtctccccg
gcctcctccccccatcatccccctcctccccctcatcctcctcaagaccactctctgcat
ccttatcctcagcctcggctgacccttcccttcctctccttgtccttctctcttctcctc
ctctccatactcctcctgcctgtctgcgagtctcgcaggggtggaggtccaggtacaggg
cccggaggtgccccaggaggacaaggtggccagaggggaggcggcacccagaggggtgtt
gtcatcccccctcagtattctccaggctcaccggttcttccaccaatcaatcccaaactg
atcaactcactcagtattgctgtcatcctggtgggcaactctagtgaagtagccttgggg
gctggacttgagaaagaggacttcctccacatcccttaccctcccaaagtcgaggtggtc
accatgaacgagaccgacccaaagagtatcatcaatcggatctgcgcacaaatgacgagg
aactcactgcaaggcgtagtgttcggtgacgacacggatcaagaggccattgctcagatc
ctggacttcatctctgcccagacacacctccccatcctgggcatcaggggagggtcctcc
atggtcatggcagcaaaggacgaccactccatgtttttccagtttggtccgtccatcgag
cagcaggcctccgtcatgttgaacatcatggaggagtatgactggtacatcttttccatc
gtcaccacatactaccctggctaccaggactttgttaataaggtccgcagcaccatcgag
aacagctttgtgggctgggagctagaagaggtcctcctactggacatgtccgtggacgat
ggagactccaagatccagaaccagatgaagaaactgcagagtcctgtcattctgctttac
tgcactaaggaggaggctaccactatcttcgaagtagctcattctgtaggtcttactggc
tatggctacacctggatcgtgccctcgctggtggctggagatgcagaccatgttccctct
gtcttccctacagggcttatctcagtgtcatatgacgaatgggactacaacatcgaggcc
agggtacgtgatgcagtggctgtcattgccacggcgacctccaccatgatgctggaccgg
gggccgcacaccctgctgaagtcaagctgcctcgggacacctgacaaaaagggctccaac
accggccactccaaggagatactgaagtacatcatgaatgtcacatttgaaggccgaaac
ctgtcattcagcgaagagggtcaccagatgttccccaagctggtcatcattcttctagac
aaggatagacaatgggacagggttggcaagtgggagagaggctctttgacgatgaggtac
catgtgtggcctcgctttgagctgtactctgcagcggaggagcgagaggaccacctgtcc
atcgtgactctggaggaggcgccgtttgtcattgtggaggacgtagacccgctcagtggg
acctgcatgaggaacacggtgccgtgtcgcaaacagctcaaactcagcaaccagacaggg
gattcagggatttacatcaagcgctgctgtaagggtttctgtatcgacatcctgaagaag
atcgccaagacggtcaagtttacatacgacctttacctggtcaccaacggcaaacacggc
aagaaggttaatgggacgtggaatggcatggtcggagaggtggtgttgaagaatgcccac
atggcagtgggttcgctcaccatcaacgaggagaggtcggaggtcatcgacttctctgtg
ccgttcattgaaacagggatcagtgtcatggtctcccgtagcaacggaaccgtctccccc
tctgcctttcttgagcccttcagtgctgatgtctgggtgatgatgtttgtgatgttgctg
atggtgtcagccgtggctgtgtttgtgtttgaatacttcagcccggtgggttacaatcgc
tgtctggcagacggacgagagcctggaggtccctccttcaccatcggtaaggcggtctgg
ctgctgtggggtctggttttcaacaactctgtccccgtgcagaatcccaaaggtaccacc
agtaagatcatggtgtcggtgtgggccttcttcgctgtcatcttcctggcctcctacact
gccaacctggctgccttcatgatccaggaggagtatgtcgaccaggtgtcgggcctgtca
gacaaaaagttccagaagccgaacgaattctcaccgccgttccggttcggcacggtgccc
aatgggagtacagagcgcaacatccgcaacaactaccgggacatgcatgcctacatgacc
agtttccaccagaagaatgtagatgaagccctgtacagtctgaagaccggcaaactggac
gccttcatctacgacgctgcagtgctgaactacatggcgggcagagacgagggctgtaag
ctggtcaccatcgggagcggcaaggtgttcgcctccaccggctatggcatcgccatccag
aaggactcaggctggaaacgagctgtggatcttgccatcctcatgctgtttggagatggt
gagatggaggagttggaggccctgtggctgacaggcatctgccacaatgagaagaacgag
gtgatgagcagccagctagacgtggacaacatggcgggggtcttctacatgcttggggct
gccatggttctgtcattcatcaccttcatctgtgaacatttgttctactggcaactgcgc
ttctgcttcatgggcgtgtgctccggaaagcccggggtcaccttctccattagcagaggt
atctacagctgcatccatggggtacaaattgaggaaaacaagtcaaccatagactcacct
tcggccaccatgaagaagaacatgaacaacacccactccaacatcctgcggttgctccgc
actgccaaggatatgaccgccgtcccaggcattaacggctctccgcacgccgctctggag
tacagccacagcggtcgtgagtctgctatctatgatatccaggagcaccggcgcagcctg
gtaggtcaccctgtagactgcaagtctgcgcctccttacatgccagaggacaacatgttc
agtgactacatcagcgaggtggagagaacttttggcaacttgcccctgaaggacagcaac
ctgtaccaggaccattaccggcaccaccacccggcctcggctctgggtatgtccggcccc
ccgcctaataggccgcgtagtttaggcagcgctagctcgttggaggggggcatgttcgat
tgtgacagtttagggggaggggtagcgcccatctttacaacccagccccgcccatccatg
actcacaggaataccaataaatttgacctgatcgctggccacacccctgcggattccaat
cagggtgggttcaagggaaacaatgtgtacggcaggttttctttcaaaggaggcgcatcc
agcacagggctcatcgggggtcatgacaggtactgtggtgggggcggggggggctcaggg
ggtgacgatgggaacattcgctctgatgtatcggatatctccacccacactgtcacctac
ggcaacctggagggcaacgccaagcggcgtaagcagtacagggacagcctgaaaaagagg
ccagcctcggccaagtgcagacgggagcaggacgagatagagctgagcggcctcaggagg
agaccccaccaccacaccgtccaccaccacttcccccacgggcccctggcacaccgcacg
gtctcacctcccctggagcggaagaggggaggaggaggggataaggtgaaccagaacccc
ttcatcccaaccttcggcgacgaccagtgtctattacacggtgccaaaccgtactacatc
aaaaagccacagacgcagcaacagcagcagcagcagcaacttctcaacaacagccgagga
ggaggggacttccgcggctccatgggagcaacttcctatttgcctgcgtccgccacagct
ggggtgatctccaatgtggcccccaggttccccaaagagctgtgtctgggcggggtggga
gggcccatggggaaccaccacgggggcaacaagctactgcctgggggcagggacacgtta
ggtttggggcagggacagagacccttcaacggtgccagcaatggacatgtttatgaaaag
ctctccagcattgaatcagacgtctga
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