Seriola dumerili (greater amberjack): 111234598
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Entry
111234598 CDS
T05606
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00780
Biotin metabolism
sdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
111234598 (hlcs)
Enzymes [BR:
sdu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
111234598 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
111234598 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
111234598 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
111234598 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
111234598
NCBI-ProteinID:
XP_022618481
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MLITLCYVYMWVRFHKCYSVLIRNSLSRLNSSSFSFSVCSSSATAPPTGCHTAARRCPSP
LPPEDIVFLQLGDKAVYVTEPQACDDISKWTVLLGSSLVCGPQIENISFIIEASGHRVGY
HSHHKSNKKVLKWSDYCLPLACCPGQPFRAVARATVDNFSRLGVAFIEDRLQLDNGLLPS
KIVPVVLLESTLSELLEKQRPQNPKTVTTRWLCSTQTEEGVAKPLPNYLLADHQHPQCRK
GSLLLTPEAKRRVEKRRGSEPFQSTHDLGPVGDSEDHSLGNHHHMEGHGHHLHLSSCHEC
LEMENSTILSVKYASAENITDLPDDNSVELDSGAETLDELEHDADGFFGRSGRFDCNSKP
PNVLVYTNGCQERFHTVRQFLSECINMENNIIYPLQPQQALSDPWLDNTRLLVLAEEETL
TPQLQTHFLTYLSQGGKVLGLASTLCPAGLCLEVKESQREKVSRLSFTKEDSTELELSVL
ASGKVYTRDTMGGGEVELWGELKGDVPHQRDMVIVRVTHGGDSGEAVLCQVHLETPPENS
SSEGFDKLKVSNALRYEVLTEILISLGLSCELHHTPAPSPVHLLATSLNAKASFLRWMET
RADQNGLLTLPKTSLRMVSFSELQDGPLLPEGSLALVTDSSESQNWAQFSMETYSKNLKT
SLLGHTLLYAEIATSTMDLLEGLSLHLPKDVGLIAVAGRQSQGRGRGRNAWLSPLGCAMF
TLGVQVELSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLTVKWPNDIYYSNLMKLGG
VLVTSTVIGTTFHLLIGCGFNVTNSNPTVCINDLIQQHNKQHTCSLQPLSCAQLIARTVS
CLELLIDSFQQGGPDAILPTYYKRWLHSGTQVHLWSEDGPEAEVVGLDHNGFLQVHSKEH
GVVSLEPDGNSFDMLKNLVVIKQR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgttaataactttgtgctacgtctacatgtgggtgcgctttcacaagtgctactcggtc
ctgatccgcaacagtctatccagattgaacagcagcagcttcagctttagcgtctgctcc
agctcggccacagcaccgccgactggatgccacacagccgcccgccggtgtcccagtccg
cttccacccgaggacattgtcttcctccagctcggagataaggccgtctacgtcacggag
cctcaggcatgtgatgacatcagcaaatggactgtgctgttggggtcctctctggtttgt
ggtccacaaatagagaatatttcattcatcatagaagcttcaggacacagagtgggctac
cattctcatcacaaatcaaataagaaagtgctgaagtggtctgactactgtcttcctctt
gcctgttgccccggccagccgttcagggcggtggctcgggccactgtggataacttcagt
cggctgggagttgcatttattgaagatcgccttcagctcgacaatggacttctgccttca
aagatagtccctgttgtcctcctagaatccaccctcagtgagctgttggagaagcagcgt
ccacagaacccaaagactgtgacgacacggtggctgtgctccacccagactgaggagggt
gttgctaagcctttacctaattacctgttagctgaccaccagcacccacaatgccgtaaa
ggcagccttctcctcaccccagaggcaaagaggagggtggagaaacgacgagggtcagag
ccattccagagcacccatgatctaggacctgttggtgactcggaagaccattccttgggg
aatcatcaccacatggagggccatggacaccacctccatctgtccagctgccatgaatgt
ttggagatggagaacagcaccatcctctctgtcaaatacgcctctgctgagaacattaca
gaccttcctgatgataattcagtagagttggatagtggggctgagactctggatgaactt
gagcatgacgctgatgggttttttggtcgaagcggtagatttgactgcaatagcaaaccg
ccaaatgttcttgtgtacacaaatggttgccaggagcgttttcacacagttcgtcaattc
ctatcagagtgtataaacatggaaaacaacataatatatcccctccaaccacagcaggct
ctgagcgatccatggctggacaacactaggctcctggtcctggcggaggaggaaacgttg
accccccagcttcagacccacttcctcacctacttgagccagggtggcaaagtcctgggg
ctagcctccaccctgtgccctgcggggctctgtctggaagtcaaggagagccaaagagag
aaggtcagcaggctgagcttcactaaggaagacagcacagagctggaactgagcgtgttg
gcgagtgggaaggtctacaccagggacactatgggaggaggggaagtggagctgtggggg
gagctgaaaggggacgttcctcatcagagggatatggttatcgtcagggtgactcacgga
ggggatagtggggaagctgtcctctgccaggtccacctggaaaccccacctgagaattca
tcatcggaaggttttgataaactgaaagtcagtaacgcactgcgttatgaagtcttgaca
gaaatcctcatctctctgggcctcagctgtgaactacaccatactccagccccaagccca
gttcacttgctggccacctctctgaatgccaaggccagcttcctgaggtggatggagaca
cgagcggatcaaaatggcctcctcacattgcccaagacctccttgaggatggtgtccttt
tctgagctccaagatggtcctttgctgcctgagggctctctggccctggtcaccgactct
tcagagtcccagaactgggcacagttcagtatggagacctacagcaagaacctgaagacc
agcctactggggcacaccctgctgtatgctgagatcgccacgtctaccatggacctgtta
gaaggactgtctctgcacttaccaaaggatgtgggtttaatagcagtagctggtcgacaa
agccagggacgaggtcggggcaggaacgcctggctcagccctcttggttgtgccatgttc
actctgggggtccaggttgagctgagctccagactcggacagaggattcccttcctccag
catctggctgctcttgcggtagtggaggctgttcgcactctgcctggataccaggacata
gacctgacagtgaaatggcccaatgacatctactacagtaatctgatgaagctcggggga
gtactggtgacttccactgtaataggaacaacctttcatctgctcataggttgtgggttc
aatgtgacaaacagcaacccaacagtttgcatcaatgacctgatccagcagcacaacaaa
cagcatacctgcagtctgcagccgctcagctgtgcccagctcattgctcgcaccgtcagt
tgtctggagctcctcatcgacagcttccaacaaggaggcccagacgccatcctccccacc
tactataagagatggcttcacagtgggactcaggtgcatctctggagtgaggatggaccg
gaggctgaggtggtgggtctggaccacaatggcttcctccaagtgcacagcaaggagcac
ggcgtggtgtcactggagcctgatggaaactcttttgacatgctgaagaacctggtggtc
atcaagcagcgctag
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