Seriola dumerili (greater amberjack): 111234737
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Entry
111234737 CDS
T05606
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04510
Focal adhesion
sdu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111234737
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111234737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Alanine_zipper
F5_F8_type_C
SBDS_domain_II
Motif
Other DBs
NCBI-GeneID:
111234737
NCBI-ProteinID:
XP_022618640
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MHQVLMPIMTLPLSLLLLALSVIGQELPSGPHGCTDGSCYPATGNLLIGRAVNLTATSTC
GLGGPEHYCIVSHLQESDKCFECNSQHRYDPHRHRNSHRIENVIYLMDRNEDNTWWQSVN
GQENVSIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFPG
IPANGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRIN
FTKLNTLGDDLLDRRFDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVDARENGMIHG
RCVCKHNTEGLNCERCRDFHNDLPWRPAEADNPHTCRECNCNGHSNQCHFDMAVYLATGN
VSGGVCDECLHNTMGRNCEMCKPFYYQDHIRDIRDPRVCVACDCDPVGSLEGGVCDSHTD
PDMGMIAGQCRCKANVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIMMGAPCDQIS
GDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRSCDCDFGGAYNNRCMMENGQCNCRRHLI
GRQCSEVQPGYFCAPLDYYKYEAEEATGHSPDDRALPGKVRPQAETDCVQHLNNQLRRHR
RHRRITNSQQHRAALRRIRQLQQTPDVRTVHREHTPSHMVTWTGPGFARVKDGAGLVFTI
DNIPYAMEYDIMIRYEPEVSEDWEAVVSITSVLLPSSLRCGNLLPTEQLYTVTLPHRNRY
IQMPRPFCFEPSNRYVVSIRFQRHGVSHRHLTAFILIDSLVLIPKYTELPGFQGNEPEAE
HRREEMIRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALPCQCDPQGSLSGECDRV
GGQCLCKLNVMGRHCDRCAPGTYGFGVNGCTACDCHSEGSLSHQCDPVTGQCQCRQGATG
RACSDCQLGQWGFPSCSPCQCNGHTDLCDPRTGECTDCRDYTAGHFCERCVDGFFGNPML
GSGEHCRPCPCPGNPGSDHFNGESCQADHSSNQIICNCKQGYTGSRCDRCAPGYYGNPEQ
VGGRCLPCDCNGNIDTQDPESCDPRTGRCLICLYHTDGPSCAQCQHGYYGNALAQDCRRC
TCVSAGTVQSACGDGQCHCDRQTGACPCRENVAGHNCDQCAPNHWNYGQDRGCEPCHCDP
QHALGSHCNMFTGQCHCRPGFGGKQCTECEQFHWGDPQVQCQECNCHPLGSEMAQCDRTT
GACECREGAAGKRCDECARGFTGAFPKCVKCHPCFQLWDDALCQIKRDLEHIQYTLQKIQ
ESGITPGVGDKRIKELEEKLKQVQDLISTEDSDRIHQLIGQSIDDLRAEIALTDGRLMGV
TRELNTTAEKEGALRNTLNDLEKELRDINNTVAHKQRLLDDYLTSGFADQFEKVKKYYQE
SVQAAEKCNASVYGPLSPVEQSKETRGLTEDLLDASKDKFLRALAAQNKSLTELQHKAHD
LDKKVHHLSHKVCGGHSNASVDGSCPDSQCGGAGCRDDQGNRVCGGQGCNGTVSASVSAL
NLARDVTDSLNVANEELQDAVRKLQEIDSLTQDVKKQAMKTLEKARKKKDNFENNNKKLK
DFIKKIRDFLTEEGADPESIEKVALQVLAITLPVNRTVLDKMIMQIKDSLSNLTNVEGIV
NQTSQYISKAKELLDQAKDAKRRAEGVKDTAINTKQALNMSEDAIERARTALKEAHINLN
STRNATAEVEERLRQLEDKQMDVMMRLNNLSMGVEALRNKTEQNRQMAKDAKALANNATD
LASSLQESLNDTEKRYRELQNKVDSLGGEAGGLDSINQRAMDIKKEADDLLNKANKGITQ
LQKLEKRFKSNERRMQRQRTELDELKENATVVRDEIREQVQKYSNCV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagttctgatgcccatcatgacgctgcccctgagcctcctcctgttggctctc
agtgtgattggacaggagctcccatcaggcccccacggctgtacagacggaagctgttac
cctgcgacaggaaaccttctgattggacgggctgttaatttaaccgccacctccacatgt
ggcctgggcggaccggagcactactgcatcgtcagccatctgcaggagtcagacaagtgt
ttcgaatgtaactcccagcatcgctacgacccgcaccgccacagaaacagccatcgcatt
gaaaacgtcatctacctcatggacaggaacgaagacaacacctggtggcagtctgtcaac
ggacaggagaatgtgagcatcagactgaacctggaggccgaattccacttcacacacctc
atcatgaagtttaagactttcagacctgcagctatgatcatcgagcgttcggctgatttc
ggccgcacatggcgcccctaccgctacttcgcctcaaactgcaccagaaccttccccggc
atccccgccaacggcctgcaccacatcaacgacatcatctgcgaggagcgctactccgac
attgaaccctccaccaacggagaggtcatttataaagttttggatcctgccattcatgtg
aaagacccctacagcttggacattcaagaacttttacgtatcaccaacctgcgtatcaac
ttcaccaagctcaacactctgggagacgacctgctggaccggcgcttcgacgtcttgcag
aaatattactacgccatctatgagctggtggtcagggggagctgcttctgttatggtcac
gcctcagagtgcgccccggtgccaggggtcgacgcccgggagaacggcatgatccacggt
cggtgtgtatgcaaacataatacagagggcctgaactgtgagcgctgcagagatttccac
aatgacctgccatggagaccagcggaggcagataatccacacacttgcagagagtgtaac
tgtaacggccactcaaaccagtgtcactttgacatggcggtgtatttggccacgggtaac
gtcagcggaggagtgtgcgatgaatgtctgcacaacaccatgggacgcaactgtgagatg
tgtaaacctttctactatcaagaccatatcagggacatcagggacccacgggtttgtgtt
gcgtgtgactgcgaccccgtgggctcgctggagggcggagtgtgcgacagtcacaccgac
ccagacatggggatgattgctggacagtgtcgctgcaaagccaatgtgaaaggcacacgc
tgcgacgactgcaaggagggatactacggcctgagccagaacgacccgctgggttgccag
ccttgcaactgtgaccctcgtggtattataatgatgggagctccttgtgatcagatcagt
ggagactgctcctgcaagagatatgtaaccggtcgctactgtaaccaatgtctgcctgaa
tactgggggctcagtaacgacctggccggctgcagatcgtgtgactgtgactttggtgga
gcctacaacaacaggtgcatgatggaaaatggccagtgtaactgcaggagacacctgatt
ggtcgacagtgttcagaagtgcagcctgggtatttctgcgctccgctggactactacaaa
tacgaggccgaagaggccaccggacactccccggatgaccgtgcactgccgggcaaagtt
cgtcctcaggccgagaccgactgtgtccagcacctcaacaaccagctgaggcgtcaccgg
cgccaccggcgcatcaccaactcgcagcagcatcgggcagcactgagacgcatccgccag
cttcagcaaacaccggatgtgaggaccgttcacagagagcacactcccagccacatggtg
acgtggaccggacccggtttcgcccgcgtcaaagacggagcgggcctggtgttcactatc
gacaacatcccctacgccatggagtacgacatcatgatccgctacgagcccgaggtctca
gaggactgggaggccgtagttagtatcacctcagtgctgctgccctccagtctccgttgt
ggaaacctcctaccaactgaacagctctacactgttactctgccgcaccgcaacagatat
attcagatgcccaggccgttctgtttcgagcccagtaatcgttacgtggtttcaatcagg
ttccagcgccacggggtctcacacagacacctgactgccttcatcctcatcgactcgctg
gttcttatcccaaaatacaccgagcttcctggtttccaaggtaatgagccggaggcggag
catcggcgggaggagatgattcgctacatgtgtctggactcctttatgatcacaccgatg
ccggccctggcagagatgtgctccaaactcatctgcagtatttcatccatcattcacgac
ggcgctctgccctgtcagtgtgaccctcagggttccctcagcggtgagtgtgatagggtc
ggaggtcagtgcctttgtaaactcaatgtcatgggtcgacactgcgaccgatgtgcccca
ggaacctacggctttggagtgaatggctgcactgcctgcgactgccactccgagggatcc
ttaagccaccagtgtgacccagttaccggccagtgccagtgccggcagggagccacgggg
cgtgcgtgctcagactgccaactgggccagtggggcttccccagctgcagcccctgtcag
tgcaacggccacacagatctctgtgacccccgcaccggggagtgtacggactgcagggac
tacacagcaggacacttctgtgagcgttgtgtggatgggttctttggaaacccgatgctt
ggctcaggggagcactgccggccctgcccctgccccggtaaccccggctcagaccacttt
aacggagagtcctgtcaagctgaccacagctctaaccagatcatctgtaactgcaaacaa
ggctacaccgggtcccgctgtgaccggtgcgcccctggttactatggcaaccctgagcaa
gtgggcgggcggtgcctgccgtgcgattgcaacggcaacatcgacacccaggaccccgag
tcgtgtgaccccaggaccggccggtgcctcatctgcctgtaccacaccgacggcccgtcc
tgtgcccagtgtcaacacggttactatggcaacgcgttggcccaggactgcagacgttgc
acctgtgtgagtgctggcacggtccagtctgcttgcggtgacggacagtgtcactgtgac
cggcagaccggcgcctgcccttgcagggagaacgttgccggccacaactgtgaccagtgt
gctccaaaccactggaactacggtcaggaccgaggctgcgagccctgtcactgcgacccg
caacacgcgctgggatctcactgcaacatgttcacaggccagtgccactgccgtccaggc
tttggggggaaacagtgcaccgagtgtgagcagttccactggggagacccacaggtgcag
tgtcaagagtgtaactgtcacccgctgggctcagagatggcccagtgcgaccggacaacg
ggagcgtgtgagtgccgggagggagcggcagggaagcggtgcgacgaatgcgctcgcggc
ttcaccggcgccttccccaaatgtgtcaagtgtcacccgtgcttccagctgtgggacgac
gcgctgtgccagatcaaaagggacctggaacacatccagtacaccttacagaagatccag
gagagcgggatcacgccgggagtcggggacaagcgcatcaaagagctggaagagaagctg
aagcaggtgcaggatctgatcagtacggaggacagcgaccggatccaccagctgattggg
cagagcatcgatgacctcagggctgagatcgccctgaccgacgggcgtctgatgggcgtc
actcgagaactaaacacaacagcagaaaaagaaggggctctgagaaacacactgaatgat
ctggagaaggaattgagggacatcaacaacactgtggctcacaaacaacgcctgctggat
gactacctcacttcaggatttgcagatcagtttgagaaagtgaagaaatactatcaggag
tcagtgcaggctgcagagaaatgcaacgcctcggtgtacggtcctctcagtccggtggaa
cagtccaaagaaacccgcggtctcactgaagacctgctggatgccagtaaagacaagttc
ctccgagctctggccgcacagaacaaatcgctgaccgagctgcagcacaaggcccacgac
ctggataagaaggtgcatcacctcagtcacaaggtatgtggtggtcatagcaatgccagc
gtagatggcagttgcccagacagccaatgtggtggtgccggttgccgcgacgatcagggt
aatcgtgtgtgtggaggtcagggatgcaacgggacggtgagcgcttctgtatcagcgctg
aatctcgccagggacgtgacggacagtctgaacgttgccaacgaggagctgcaggacgcc
gtcaggaagctccaggaaatagactctctgacgcaggatgtgaagaagcaggcgatgaaa
acgctggagaaagccaggaaaaagaaggacaacttcgaaaacaacaacaagaagctcaaa
gatttcattaagaagatcagagactttctcactgaggagggagcagatccagagagcata
gagaaggtggctctgcaggtcttggcgatcacgctgccggtcaacaggaccgtcctggac
aagatgatcatgcagataaaggacagcctgtccaacctcaccaacgtcgagggcatcgtc
aaccaaacctcgcagtacatcagcaaagccaaggagctgctcgaccaagctaaagacgcc
aagaggcgagcagagggagtaaaggacacagccatcaacacaaagcaggctttgaacatg
tcagaggacgccatagagagagcgaggacagctctgaaggaggcccacattaacctcaac
agcacaaggaacgccaccgctgaggtggaggagaggctgaggcagctggaggataagcag
atggacgtcatgatgcgtttaaacaacctctccatgggggtcgaggctctgaggaacaag
acggagcagaacagacagatggcaaaggacgccaaagcactggctaacaacgccactgac
ctagcatcctcactgcaggagagcctcaacgacacagagaaacgttaccgtgagctgcag
aataaggtggactctctgggtggggaggccggaggtctggacagcatcaaccagagggca
atggatatcaagaaggaggcagacgacctcttgaataaagccaacaaagggatcacacaa
ctgcagaaactggagaaaaggttcaagagcaacgagcggcggatgcagaggcagcgcacg
gagctggacgagctgaaagaaaatgccaccgtggtgcgggacgagatccgggaacaagtg
cagaagtacagcaactgtgtgtga
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integrated database retrieval system