Seriola dumerili (greater amberjack): 111236215
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Entry
111236215 CDS
T05606
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111236215 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sdu04090
]
111236215 (vcam1)
04091 Lectins [BR:
sdu04091
]
111236215 (vcam1)
CD molecules [BR:
sdu04090
]
Proteins
111236215 (vcam1)
Lectins [BR:
sdu04091
]
I-type lectins (Siglecs)
111236215 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_C17orf99
ICAM1_3_5_D2
Ig_4
C2-set
C1-set
ICAM_N
Izumo-Ig
REJ
Motif
Other DBs
NCBI-GeneID:
111236215
NCBI-ProteinID:
XP_022620608
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MSVCRIFIQLITAVLLMSSWCVQGLRVSVFPRHPLFRLGERQQLVCSVQDCPLVPSLSWS
LLGDRPLTASVSTNGSRSVVTFDPVMMEHEGTLLCRVNCGGDKREGKTPVHVYSFPSAPV
IQGQDQLKLGAESILTCHVSDLYPAEQLTLTWFMGGSFLQSTVGDPGSSSVRSEYKFTPQ
NQDSGSNISCRAMLDLPDLPAGSRTRETTVPLNILYAPVVTWISNSVLVMADSPLTLSCS
VEGNPEPTISWSLRTADGGSEWRGGGRQLVFRAVSLSEAGRYECEARNSEGNQTAAVDLT
VHAPPNDTSISVSPGEEVVEGQQVTITCRSHGAPPPNLVLKKEGVELQRTDPASSLLSFS
LSSALLEDSALYQCEASNQYGSQLESRSIRVRAHPLQVQPGPVVSVAERGSDLVLTCTAS
GCLHPPTLTWVDQDQTVLQRTQQQDGLSQLHLQDLDLQDQGFYRCEAECESVTRTRTTQV
QVYSFPSDPVVKDPGPVVLGQEAVLRCDVINVFSTNWLRIQWLLGNTTLMSESFEFSGSL
QNISSVLKHRIEEDQQVLTCRAELKLMRDDEERWWSRRTSVPLLVHYAPRRTSISVSPGE
EVMEGQQVTITCHSDGAPPTTLVLKKEGVGLQRTDPASSSLSFSLSSALLEDSALYQCEA
SNQYGSQLESRSIRVRAPPRNTTVLVLPSTVVQEGQNVTVCCQTISSPPSAVILKKLTNG
TEIYSLNGTFLLVNVTARDSGLYQVNVTNDLGYQVKFFSISVRERSTSLPPRLSVIIIPA
ICVAAGLAATALLLDYLRRSRKKGFYQLPQSAAPSA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctgtaggatctttattcagctcatcacagctgtgttgctgatgtcatcgtgg
tgcgttcagggtctgcgtgtcagcgtgtttcccagacaccctctgttcagactgggggag
cgtcagcagctggtctgctctgtccaggactgtcctctggtcccaagcctctcctggtcc
ctgctgggggaccggccactgacagcctccgtcagcaccaatgggtccaggtctgtggtg
acctttgaccctgtgatgatggagcatgaaggaactctgctctgcagggttaactgtgga
ggagacaagagggagggcaaaacccctgtgcacgtgtactccttcccatcagcccctgtg
atccaaggccaggaccagctgaaactgggggcggagtccatcctgacctgtcatgtgtct
gatctttaccctgccgagcagctgaccctcacctggttcatggggggctcattcctgcag
agcactgttggagatcctggatccagctctgtccggtctgaatacaagttcactccccag
aaccaggactcaggatccaacatcagctgcagggccatgctggacctgccagacctgcca
gctgggagcaggaccagagagaccaccgttcccctaaacatcctctatgctcctgtggtg
acatggatctcaaactcggtgttggtgatggctgactctccgctcaccctctcttgttcg
gtggagggaaaccctgaaccgaccataagctggagcttgaggacggcagatggtgggtct
gagtggcggggggggggccgtcagctggtcttcagagcagtgagtctgtctgaagccgga
cgctacgagtgtgaggccaggaacagcgaggggaaccagacggccgctgtggacctgact
gttcacgctccacccaatgacacctccatctctgtgagtccaggtgaggaggtggtggag
ggtcagcaggttacgattacctgccgctcacatggagctccgccccccaacctggtgctg
aagaaggaaggggtggagctgcagaggactgaccccgcctcctccttactctccttcagc
ctctcctccgccctcctggaagactccgccctctaccagtgtgaagcctcgaaccagtac
ggatcccagctggagtccagatccatcagggtcagagctcaccctctgcaggtgcagccc
ggtcctgtggtctcagtagcagagaggggttcagatctggtcctcacctgcacagcttct
ggatgtctccaccctcccactctcacctgggtggaccaggaccagaccgtcctccagagg
acgcagcagcaggacggactgtcccagctccacctgcaggacctggacctccaggatcag
ggattctaccgctgtgaggccgagtgtgaatctgtcaccaggaccagaaccacccaggtc
caggtctactcgtttccatctgatccggttgtgaaggatcctggtcctgttgttctgggt
caggaggcagtccttcgctgtgatgtcattaacgtcttttctaccaattggctgaggatc
cagtggctgttggggaacacaacgctaatgtcagagtccttcgagttctccggttcttta
cagaacatctcatctgttcttaagcaccggattgaggaagaccagcaggttctgacctgc
agagcggagctgaagctgatgagggatgacgaagagaggtggtggtccaggaggaccagt
gtccctctgctggtccactatgctccgagaagaacctctatctccgtgagtccaggtgag
gaggtgatggagggtcagcaggtaacaattacctgccactcagatggagctccgcccacc
acactggtgctgaagaaggaaggggtggggcttcagaggactgaccccgcttcctcctcc
ctctccttcagcctctcctccgccctcctggaagactccgccctctaccagtgtgaagcc
tcgaaccagtacggatcccagctggagtccagatccatcagggtcagagctcctccgagg
aacaccacagtcctggtcctaccgtctacggtggtccaggagggacaaaatgtcacagtc
tgctgccaaaccatcagctccccgccatcagccgtgatcctgaagaaactgaccaatggg
acagagatatactccctcaatggcaccttcctattggtcaatgtcacggccagagactct
gggctgtaccaggtcaacgtgaccaacgacctaggctaccaggtcaaattcttcagcatc
agtgtcagagagagaagcaccagtcttcctccaagactcagcgtcatcatcatcccagcc
atctgcgtcgcagctgggctggcagctactgctctgctcctcgactacctgaggagatca
agaaagaaaggcttctatcagcttcctcagtctgctgcaccttcagcctga
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