Sulfitobacter dubius: R1T39_00190
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Entry
R1T39_00190 CDS
T09506
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00330
Arginine and proline metabolism
sdub00480
Glutathione metabolism
sdub01100
Metabolic pathways
sdub01110
Biosynthesis of secondary metabolites
sdub04148
Efferocytosis
Module
sdub_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
R1T39_00190
09106 Metabolism of other amino acids
00480 Glutathione metabolism
R1T39_00190
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
R1T39_00190
Enzymes [BR:
sdub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
R1T39_00190
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOI29168
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Position
38985..40145
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AA seq
386 aa
AA seq
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MQHTAPLSATPAAYLAKHSPDAPVLFIAPSVLQATARRFQADFDGLVTYAVKANDRTEVL
SNLVAAGITTFDVASPAEMAAVRAVCPQAVLHYNNPVRSAAEVKAGIAAGVYSWSIDDMS
ELAKLRDVPRDNEVAVRFALPVKGAAYDFGSKFGAAPEQAAALLRAVVEMGFTPSMCFHP
GTQCNDPQAWVQYVHAAADILRAAGVSIKRMNIGGGFAVDRGFDAPDHRAVFAAVKAALV
ESFGAEAPTLLCEPGRAMVADAAVLATRIKGMRNEGRTVFLNDGIYGGLPDLRDMGLSGL
VDVVGPEGALRQGAPTPRVVFGPTCNSLDRLPDGLPMPEDAQTGDYLLFGGMGAYSIAMS
TAFNGYGLAGVALVSDLGAQPKRKAA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacaccgcccccctttcagccacgcccgccgcctatcttgcgaaacacagcccc
gacgcgccggtgctgttcatcgccccttcggtgctgcaagccacggcgcggcgttttcag
gcggacttcgacgggctcgtgacctacgcggtcaaggccaacgaccggactgaggtgctg
tcgaacctcgtcgccgccgggatcaccacttttgatgtcgcctctccggcggagatggcg
gcagttcgcgcggtgtgcccgcaggcggtgctgcattacaacaacccggtgcgttcggca
gcggaggtaaaggcagggatcgcggcgggcgtctatagctggtcgattgatgacatgtcg
gaattggccaagctgcgcgacgtgccgcgcgacaatgaagtggcggtgcgtttcgcgctg
ccggttaagggcgcggcctatgacttcggctcgaaattcggcgcggcgcctgagcaggcg
gcggcgctgctgcgcgcggtggttgaaatggggttcaccccttcgatgtgtttccacccc
ggcacgcagtgcaatgacccgcaggcttgggtgcaatatgtccatgcggcggcggatatc
ctgcgtgcggcgggtgtctcgatcaaacggatgaatatcggcggggggtttgctgtagat
cgtggatttgacgcgccggatcaccgagcggtttttgctgcggtgaaggcggcgttggtt
gagagttttggcgcggaagcaccgacgctgctctgcgagccgggccgcgcgatggtggcc
gatgcggctgtcttggcaacccgtatcaaggggatgcgcaatgaggggcggactgtcttc
ttgaacgacggtatctatggggggctgcccgatctgagggacatgggcctttcggggctg
gtcgatgtggtgggccctgagggggcgctgcgccaaggggcgccgacaccgcgcgtagtc
tttggccccacttgcaattcgttggatcgtttgcccgacggcctgccaatgcctgaggat
gcgcagaccggggattacctcttgttcggcggtatgggggcctattccatcgccatgtcg
accgcctttaatggctatggtctggcgggggtcgcacttgtgtccgaccttggggcgcag
cccaagcgcaaggcggcctga
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