Sulfitobacter dubius: R1T39_06615
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Entry
R1T39_06615 CDS
T09506
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00190
Oxidative phosphorylation
sdub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
R1T39_06615
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R1T39_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdub03019
]
R1T39_06615
Enzymes [BR:
sdub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
R1T39_06615
Messenger RNA biogenesis [BR:
sdub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R1T39_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WOI30375
LinkDB
All DBs
Position
1332259..1334433
Genome browser
AA seq
724 aa
AA seq
DB search
MTQADFLQAPFPPATDLPELDTAGPGRFFNRELSWLDFNWRVLEEAENPRVPLLERLRFL
SISATNLDEFYTVRVAGLRELAQAGNTTAAADGLSPGEQLVLINEDARNLMMSQQRVLVD
LMAEMDDQNIMLERTADLTEADLKHLEGVFLNQVFAVLSPLAIDPAHPFPFIPNTGYALA
LQLERSRDKRPLQALLPIPAQIDRFVPLPAPDGCLRYLPLEDLLIINIPNLFPGYKLKAH
FEFRVLRDSDLEVEDEAEDLVREFEVALKRRRRGEVVRLTHSAGAPEKLKSVVMRELCVR
PQDVIEIEGMLGIADLSKLVTDARPDLLWPQFTPRVPERVSDHDGDMFAAIRQKDMLLHH
PYETFDMVVRFLAQAARDPDVVAIKQTLYRTSRDSPIVSALCEAAEDGKSVTALVELKAR
FDEAANIRQSRRLERAGAHVVYGFLDLKTHAKISTVVRREGDQLVTYTHYGTGNYHPITA
RIYTDLSLFTCDSSLGRDATKVFNFLSGYAPPEQLENLAISPTTLKPRLLEMIATEADHA
RAGRPAVIWAKMNALIDAEVIDALYAASQAGVEISLVIRGICGLRPGVKGLSENIRVKSI
IGRFLEHSRIVCFGNGHGLPHKKARVFMSSADWMGRNLNRRVETLVEIENPTVKAQITSQ
IMAANLADVAQSWVMGPDGKFTRPAVPEGTFAFNCHRFFMENPSLSGRGSAGASDVPKLT
HTED
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagctgatttcctgcaagcgccctttccgccagccaccgatctgcccgagctt
gataccgccgggccgggccgtttcttcaatcgtgagttgagctggctcgacttcaactgg
cgggtgctggaagaagcagagaacccgcgcgtaccgctgctggaacggctgcgttttctg
tcaatctcggccaccaaccttgatgaattctataccgtgcgcgtcgcggggctgcgcgaa
ctggcccaagccggtaacaccaccgccgccgccgacgggctaagccccggtgagcaattg
gtgctgatcaacgaagacgcccgcaacctgatgatgtcccagcagcgcgtgctcgtcgat
ctgatggccgagatggacgaccagaatatcatgctggaacgcacggcggacctgaccgag
gcggaccttaagcatctcgaaggggtctttctcaaccaagttttcgccgtgctgtcgccg
ctggccatcgacccggcacacccctttccctttattcccaacactggctacgcgttggcc
ctgcaactggagcggagccgcgacaaacgcccgctgcaagccctgctgccgatcccggcg
cagatcgaccgtttcgtccccctgcccgcgcccgatggctgcctacgctacttgccgctt
gaagacctgctgatcatcaacattcccaacctctttcccggctataagctgaaggcgcat
ttcgagttccgcgtgttgcgcgacagcgatcttgaggtggaagacgaggccgaagacctc
gtgcgggaattcgaagtcgccctgaaacgccgccgccgtggtgaagtcgtgcggctgacc
cattccgctggcgccccggaaaagctgaaatccgtcgtcatgcgcgagctttgcgtgcgg
ccccaagacgtgattgaaatcgaaggtatgttgggcattgccgacctgtcaaaactggta
accgacgcccggcccgaccttctgtggccgcagttcaccccgcgggtgcccgagcgggtc
agcgaccacgatggcgatatgttcgccgcgatccggcaaaaggacatgctgctgcaccac
ccctatgagaccttcgacatggtggtgcgcttccttgcccaagcggcgcgggatccggat
gtcgtcgcgatcaaacagacgctctaccgcacctcgcgcgacagcccgatcgtcagtgcg
ctctgcgaggcggcggaggacggcaaatcggtcacggcgctggtcgagcttaaagcccgc
tttgatgaggccgccaatatccgacagtcacgccggttggagcgggcgggcgcgcatgtg
gtttacggctttctcgacctcaagacccacgccaaaatctcgaccgtggtgcgccgcgag
ggcgaccaactggtgacctatacccactacggcaccggcaactatcacccgatcaccgca
cggatttatacggacctgtcgcttttcacctgcgactcaagccttgggcgcgatgccacg
aaggtcttcaacttcctctcgggctatgccccgccagagcaattggagaatctcgccata
tcccccaccacgctcaagccgcgcctgcttgagatgatcgccaccgaggctgaccatgcc
cgcgccggacgccctgccgtgatctgggccaagatgaacgcgctgatcgacgccgaggtg
atcgacgcgctttatgctgccagccaagccggcgtggaaatcagcctcgtcattcgcggc
atctgcgggctgcgccccggggtgaaggggctgtcggaaaacatccgggtcaaatccatc
atcgggcgttttctggaacacagccgcatcgtctgttttggcaatggccatgggctgccg
cataaaaaggcgcgggttttcatgtcttccgccgactggatgggccgcaacctcaaccgc
cgggtcgagactttagtcgagatcgagaacccgaccgtcaaggcacagatcaccagccag
atcatggccgccaatctggctgacgtggcgcaaagctgggtcatggggccagatggcaaa
ttcacccggcccgccgtgccggaggggactttcgcgtttaactgccaccgcttctttatg
gaaaacccctcgctatcggggcgcggcagcgcgggggcgtcggatgtgcccaagctgacc
catacagaggattga
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