Solanum dulcamara (climbing nightshade): 129872308
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Entry
129872308 CDS
T09577
Name
(RefSeq) alpha-farnesene synthase-like
KO
K14173
alpha-farnesene synthase [EC:
4.2.3.46
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00909
Sesquiterpenoid and triterpenoid biosynthesis
sdul01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
129872308
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.46 alpha-farnesene synthase
129872308
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
RH_dom
Motif
Other DBs
NCBI-GeneID:
129872308
NCBI-ProteinID:
XP_055803223
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Position
11:complement(49566000..49570516)
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AA seq
530 aa
AA seq
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MDQSLIQRRNANYKPNIWKYDILQSLKSQYSEEKYKREVQKLKEEVLCLLAETVNPLTKL
ELIDSINKMSLSHLFDKEIMVSLQDMEYAKKKDSRTQMDLYSTALYFRIFRQYGYYVPQD
VFLSYMDEMGEQFEVDPNMDPKTMMQLLEASHLALKDENILNEARIFCTSNLKSSNDTIP
LHWMVEWYNTTRQISKEENEEKGSNLKFLQLAKLNFNMVQAEHQKDLVDILRWWRNLRLI
EHVSFSRDRIVESFLWSVGVAFEPQHSNFRNWLTKAITFIIVIDDVYDIYGSLKHLQVFT
DAVVRWDPKEVEQLPSCMQICFWKLYDTTNDVALEIQQQKGCKFPVSTYLQKVWAEFCKA
LLVEAKWDSKGHTPTFGEYLDNGWKSSGGTVLSLHILLGLAQDFSQVDDFLENEQDLIYY
SSLIIRLCNDLGTSTAELERGDVSSSILCYMRKSNVKEDVARDHIKEMVMETWKKMNKHC
LENSSPLIKYIMNMARVAHFIYQNGDGFGVQDKQTRKQILSSLIQPLPLN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagccttattcaacgacgaaatgctaattacaagccaaatatttggaagtac
gacatcctccagtcacttaaaagtcaatattcagaagagaagtacaaaagagaagttcaa
aagttgaaagaggaagttttgtgccttctggcagaaacagtgaatccattgaccaaatta
gagcttatagacagcataaacaaaatgtccctctcccatctctttgacaaggaaatcatg
gtgtctctacaagacatggaatatgcaaagaagaaggattcacgcactcaaatggatctc
tattctactgccttatattttaggatttttaggcagtatggatattatgtgccacaagat
gtattccttagctatatggatgaaatgggtgaacaattcgaggtagacccaaatatggat
ccaaaaacaatgatgcaactacttgaagcctctcacttggccttaaaggatgagaatata
ttgaatgaggctagaatattttgcactagcaatctgaaaagttccaatgacaccattcca
ctgcattggatggtggaatggtacaacaccacaaggcaaatctccaaagaggaaaatgag
gaaaaggggtcaaatttgaagtttcttcaactagctaaactcaacttcaatatggtccaa
gctgagcatcaaaaagatcttgtggatattttgaggtggtggaggaatttgagactgata
gaacatgtaagcttcagcagagatcgaattgtcgaaagctttttgtggtcagtgggtgtt
gcttttgagcctcaacattctaatttcaggaattggctcaccaaagctatcactttcatt
atagtaattgacgatgtctacgacatttatggctctttgaaacacctacaagtcttcacc
gatgctgttgtcagatgggaccctaaggaggttgagcaattaccatcatgtatgcaaatc
tgtttttggaaactatatgataccacaaatgatgtagctcttgaaattcagcaacaaaaa
ggctgcaaatttccagtgtcaacatatctacaaaaagtgtgggcagaattttgcaaagca
ctgcttgtggaagccaaatgggattcaaagggtcatacaccaacatttggtgaatattta
gataatggatggaaatcatcaggtggcactgtgctatctcttcatattcttcttggtttg
gctcaggatttctcccaagttgatgattttctggaaaatgaacaagaccttatatactat
tcctcccttataatccgactttgcaacgaccttgggacttcaaccgctgaactggaaaga
ggtgatgtgtcttcatctatcttgtgttacatgagaaaatcaaatgtaaaggaagatgta
gcaagggatcatatcaaagagatggtgatggaaacatggaagaaaatgaacaaacattgt
ttagagaattcatcaccattaataaagtatataatgaatatggcccgtgttgcgcatttc
atatatcaaaatggagatggatttggtgttcaagataaacaaaccagaaaacaaatctta
tcctctttgattcaacctcttcctctcaattga
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