Solanum dulcamara (climbing nightshade): 129872338
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Entry
129872338 CDS
T09577
Name
(RefSeq) putative PAP-specific phosphatase, mitochondrial isoform X1
KO
K01082
3'(2'), 5'-bisphosphate nucleotidase [EC:
3.1.3.7
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00920
Sulfur metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
129872338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129872338
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
129872338
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
129872338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Inositol_P
Motif
Other DBs
NCBI-GeneID:
129872338
NCBI-ProteinID:
XP_055803276
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All DBs
Position
11:49010152..49017177
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AA seq
422 aa
AA seq
DB search
MDLLRYSASRLPAAHPQHLFRTPFRRRFVAVRSSLSLPFLEQKTKYYSELEAAVDVVERA
CRLCVDVKKSLFSSDGRILEKNDQTPVTIADFGVQALVSLDDIVTCLDYIPILIEMNRLF
PSIPLVAEEDSAFLRSNNLVGSVVDVVKNKATLGDEVTEDNILKAIDRGGKDAYVFAPEP
ATYWILDPIDGTRGFVKGSEALYVVGLALVVEGKIVLGVMGCPNWHEDCSENSITGVQEN
RSSRAGIIMVSHVGCGTWTKRLSDILTIESPQTWTRCSVDSCQIVQGARFTIPESQTWKS
LPLSGLFDAKTDSENTGEGNILLLSACCGSLCKYLMVASGRASVYIQGKNATSIIKVWDH
AVGIICVHEAGGKVTDWEGSSLDFAADQTERRLIFPSGGVLVTNGSLHSKIIRMISSHSS
VP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccgttactccgcctcccgcctccctgcagctcatcctcagcatctcttc
cgtacaccatttcgccggcgtttcgtcgccgttaggtcgagtttgagccttccgttcctg
gagcaaaaaaccaagtattatagcgagctcgaagctgctgttgatgttgtcgagcgagct
tgtcgtctctgcgttgatgtgaagaagtcgttgttttcaagtgatggtaggattcttgag
aaaaatgaccagaccccagtcactattgcagattttggagtgcaggctttagttagtttg
gatgatattgttacgtgtctggattacatccctattctgatagagatgaacagacttttt
ccctctatccctttggtggctgaagaggactctgcattcttgcgttcaaataatctggtt
ggctcagtggttgatgttgtaaagaataaggcaactttaggagatgaagtaacagaagat
aatattttgaaagcaattgacagagggggaaaggatgcttatgtatttgcgcctgagcca
gccacttactggatactggatcctattgatggtacacgagggtttgttaaaggtagtgag
gctctctatgtggttggtttggcacttgtagttgaaggaaagattgtcttaggagtcatg
ggctgccccaattggcacgaagactgttctgaaaattctatcactggggtccaagaaaat
agaagttccagagcagggatcatcatggtttctcatgtgggttgtggaacatggacaaag
aggttgtcagacatactaaccattgagtcacctcagacttggaccagatgctctgttgac
agctgccaaatagtgcagggggcacgctttactattcctgaaagtcaaacatggaaatct
ttacccttgtcgggtttatttgatgcaaaaacagactctgagaacacaggagaagggaac
atacttcttctgtctgcatgctgtggaagtttgtgcaaatatctgatggtggcttctggt
agagcatccgtttacattcaggggaagaacgcgacatctattatcaaggtctgggaccac
gctgttggaatcatatgtgtccatgaagctggagggaaggtgactgattgggaaggaagt
tcacttgattttgcagcagatcaaactgagcggagactcatctttccctcaggcggtgtt
cttgtgaccaatgggagcttacatagcaagattatcagaatgatctcttcacattcatca
gttccttga
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