Solanum dulcamara (climbing nightshade): 129876988
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Entry
129876988 CDS
T09577
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129876988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129876988
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129876988
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
129876988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
129876988
NCBI-ProteinID:
XP_055808440
LinkDB
All DBs
Position
12:complement(1164888..1169062)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSEGYDSTMSNPTNNSSNGIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKHHLASFNYFV
KTEIKKIVRANHEIRSTRDPSIYLRYRDVRIGEPSMIYDGVREKLSPQKCRLSDLTYAAP
IYVTVDYTMTRNGQISMSTQKDVTIGRMPIMLRSCSCVLCEKDEEQLAKLGECPLDPGGY
FVIKGREKVILIQEQLSKNRIIIDTDKKGCVQASVICSTEKTKSKTVIKMVKEKVYLELN
MFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSSLLLPSIEECAGLKLYTQHQALEFLE
SDKMLTMPSYSTGPVEKGARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRMMEAILN
KDAMDDKDYVGNKRLELSGQLLSLLFEDLFKTVNDEARRAFDARPNASDLLYFLKKSNRI
TLDLERTLSTGNWDIKRFRMHRKGTTEVVARLSYIGTLGYMTKIKPQFEKSRKVSGPRAL
QPSQFGMICPCDTPEGEACGLVKNLALLTHVTTDEDERPIISLCYDLGVEDLEQLSAAEL
HTPNSYLIVLNGLMLGKHKSPHRFSNAMRKLRRAGQIGEFVSIFVNDKQCCVYIASDGGR
VCRPLVIAEKGVSRIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEVT
PDTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL
LMYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
MKKYSAICQKYNNCTSDRLIKPQRQGYEAERMQILDDDGLASPGEIIRNHDIYVNKESPT
RTPVTSPLDLPDSAYKPSRQTYKGLEGETAVVDRVALHSDENNNLSIKFMIRNTRRPEIG
DKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVS
CGRFHYGSAFGEPSGHADTVDAIGETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYY
QKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLM
LSSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENMSTMKLPYACKLLFQELQSMNIV
PRLKLAEA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggttatgattctactatgtccaatccaacaaacaactcgagcaacggaatt
gacaagcagtaccttgcttctcccattaagaattcagtggacaagtatcaacttattcca
gagttcctaaaggtgagaggattggtgaagcatcacttggcctcgttcaattactttgtt
aagacggagataaagaagattgtccgtgcaaatcatgagattagatcaacacgggaccct
agtatttatcttaggtacagggatgttcgtattggtgaaccatcaatgatttatgatggt
gtaagggagaaactaagtccacagaaatgtcggctatctgaccttacctatgcagctcca
atttatgtcacagtcgactacacaatgacaaggaatgggcagatatcaatgtcaacgcag
aaggatgttaccattggacgaatgcctattatgttaagaagttgttcgtgtgtgctatgt
gagaaagatgaagaacaattagcaaaacttggagaatgcccacttgatccaggaggatat
tttgttatcaaaggcagagagaaggtaattttaattcaagagcaactctcgaagaacagg
ataatcattgatacagataaaaaaggctgtgtacaagcatctgttatctgcagcacagaa
aaaacaaaaagcaaaacagttataaaaatggtcaaagaaaaggtatacttagagttgaat
atgttcaaaaccaaggtccccataatggttgtcatgaaggccatgggaatggaaagtgat
caagaggttgtacaaatgataggaagagatcctcgatttagttctttgcttttgccatca
atcgaggagtgtgcaggtcttaagttgtatacacaacatcaagcattagagtttctcgag
agtgacaagatgcttacaatgccttcatattctactggtccagttgagaagggagcccga
gctttgagtattcttcgtgacatgtttcttgcacatgttccagtccatcaacataatttc
cgcaaaaagtgcatatacgttgcagtaatgatgaggcgcatgatggaagcaatcttaaac
aaggatgcaatggatgacaaggactatgtggggaacaaaagattggagctctccggtcag
ctattatctctcctttttgaggatttgttcaagacagtgaatgatgaagctaggagggca
tttgatgctagacccaatgcttcagacttgttatattttttaaagaaaagtaatagaatt
actttggatttggagagaaccctatctacgggcaactgggatattaaacgatttaggatg
cacaggaaaggcacgactgaggttgttgctaggctatcatacatcggaacgttgggctac
atgacgaagatcaaaccacaattcgagaagtctagaaaagttagtggtcctagagcactg
caacctagccagtttggcatgatctgcccttgtgatactccagaaggcgaagcttgtgga
ttggtgaaaaacctggccttgctgactcatgttacgacagatgaggatgagcgccctatt
atttctctgtgctacgacttgggtgttgaggacttggaacaactttcagcagcagaactt
cacacgccaaattcttatctcatcgtactaaatggacttatgctaggcaagcacaagagt
ccgcaccgattttctaatgcaatgaggaagctacggagggctggtcaaatcggggagttt
gtaagcatctttgtgaatgataagcagtgctgtgtctacattgcttcagatggtggacgt
gtctgtcgtccacttgtaattgctgaaaaaggtgtttctaggatcaaggagcaccatatg
aatgagttgagggatggtgtgcgtgacttcaacagctttctaagagatggtttgatagaa
tatcttgatgtcaacgaggagaacaactcattgattgctctatacgaaaaggaggtgaca
ccagatacaacacatattgagattgagcctttcacgatcttaggtgtttgtgccggtttg
ataccttatcctcatcacaatcagtcccctcggaatacctatcagtgtgcgatgggtaag
caagctatgggaaacattgcctataatcagttgaatcggatggatggtttgctctacctt
ttgatgtatcctcaacgccctttactgactacaagaacaattgagctggttggatatgat
aaactaggggctgggcagaacgccactgttgctgtgatgagttatagtggctatgacatt
gaggatgcaatagtaatgaacaagtcttctttggatcgaggttttgggcgttgcatagtg
atgaagaaatactcagccatatgtcagaagtataataattgtacatcagatagactaatt
aaaccacaacgtcaaggttacgaagcagagaggatgcagattctggatgatgatggatta
gcttctccaggagaaattattagaaatcatgatatctatgtcaacaaggagtcccctacg
aggacaccagtcacatctcctttggacttgccggatagtgcatacaagccaagtagacaa
acttataagggtcttgaaggggagacagctgtcgttgatagagtggctcttcactctgat
gaaaacaacaatttaagcatcaaatttatgatccgtaatacccgtaggcctgagattggt
gacaagtttagtagcagacatgggcagaaaggagtctgcggcaccattgtacaacaggaa
gatcttccattttctgaacgtggcatttgtcctgatcttattatgaatcctcacggattt
cctagccgaatgacagtgggaaagatgattgagctccttggaagtaaagctggagtttca
tgtggtaggtttcattacggcagtgctttcggagaacccagtggtcatgcagacacggtt
gatgctatcggtgaaactctggtaaagcatggatttagctacaatggcaaggattttatt
tattcaggtattactggtatgccactacaagcatacattttcatggggccaatatattac
caaaagctgaaacacatggtcctagataaaatgcatgctcgcgggagtggacctcgtgtt
atgatgacaagacaacctaccgaagggaggagtagaaatggaggtttacgtgtgggagaa
atggaacgtgattgtttgattgcatatggtgcaagtatgttgatacacgagcgcttgatg
ctttccagtgatccatttgaggttcaagtttgcagaaaatgtggtttattgggatattac
aactacaagctgaagactggcatttgttccatgtgtaagaacggggaaaacatgtctacg
atgaagttgccttatgcgtgcaagctcctattccaggagctccaatcaatgaacatcgtt
ccgcgattaaaactagcggaagcttga
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