Solanum dulcamara (climbing nightshade): 129880516
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Entry
129880516 CDS
T09577
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00270
Cysteine and methionine metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
129880516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129880516
03032 DNA replication proteins [BR:
sdul03032
]
129880516
03036 Chromosome and associated proteins [BR:
sdul03036
]
129880516
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sdul02048
]
129880516
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
129880516
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129880516
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
129880516
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129880516
Prokaryotic defense system [BR:
sdul02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
129880516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
BAH
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
129880516
NCBI-ProteinID:
XP_055810931
LinkDB
All DBs
Position
1:complement(37096546..37106477)
Genome browser
AA seq
1566 aa
AA seq
DB search
MGSLVALDKPDTDAGYKKNKSKEDSVSKRKASATDKKEKKQPVSETIEDPTAARKRPKRA
AACSDFKEKSVHLSKNASVIETKKDHCVEEEDVAIRLTAGLQDSERPCRRLTDFVFHNSE
GIPQPFGMSEVDDLFISGLILPLEDSLDKENAKGIRCEGFGRIEEWAISGYEDGTPVIWI
STETADYDCIKPSGSYKKFYDHFLAKATACVEVYKKLSKSSGGNPDLSLHELLAGVVRAM
NGIKCFSGGVSIWDFVVTQGGFIYKQLIGLDDTSKKTDQLFVELPVLASLRDESSKQETL
AQPEPISSGKALRIGPKAGNGKDKIEESGLANGPAPEDEDLKLAKLLHEEEYWRSLKQKK
GRNTSSSSSKIYIKINEDEIASDYPLPAYYKTSNEETDEYIVFDSGVDTYHIDELPRSML
HNWALYNSDSRLISLELLPMKACADIDVTIFGSGVMTADDGSGYNFDTDANHSSSGGSRS
AEIDGMPIYLSAIKEWMIEFGSSMIFISIRTDMAWYRLGKPSKQYAPWYEPVIKTARLAV
SIITLLKEQSRVARLSFGDVIKRVSEFKKDHPAYISSNVDVVERYVVVHGQIILQQFSEF
PDVSIRNCAFAIGLSRKMEERHHTKWVIKKKKVMQRHEQNLNPRASMSPSVKRKAMQATT
TRLINRIWGEYYSNYSPEVSKEVVDCEVKDDDEADEQEENEEDDVPEENLDVPEKAHTPS
STRRHIKSRSDSKEINWDRESIGKTASGELLFKKARVHGHEIAVGDSVLVEHDEPDELPS
IYFVEYMFEKLDGSKMLHGRMMQRGSDTVLGNAANEREVFLINDCMNLQLGDVKESIAVN
IRMMPWGHQHRNANADKLDRAKAEDRKRKGLPTEFYCKSFYRPERGAFFRLPFDKMGLGN
GLCYSCELQRTDQEKESFKFDMSNSSFVYLGTEYSVDDFVYVSPDHFTAERGGSGTFKAG
RNVGLMAYVICQLLEIVGPKGSKQAKVDSTNVKVRRFFRPEDISSDKAYSSDIREIYYSE
EIHTVPVETIKGKCEVRKKYDISSEDVPAIFDHIFFCEYLYDPLNGSLKKLPAQIKLRFS
KIKLDDATSRKRKGKGKEGEDEDGELNEASPQNRLATLDIFAGCGGLSEGLQHSGVTDTN
WAIEYEEPAGDAFRLNHPKTKVFIHNCNVILRAVMQKCGDSDDCISTPEASELAAAMDEN
ELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYYRPKFFLLE
NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEVLPE
WPEPMHVFAVPELKITLSETSHYAAVRSTASGAPFRSLTVRDTIGDLPVVGNGACKTCIE
YQGDPVSWFQKKIRGSSITLSDHISKEMNELNLIRCQRIPKRPGADWRDLQDEKVKLSNG
QLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPEQDRIVTV
RECARSQGFPDSYQFAGNILHKHRQIGNAVPPPLAYALGRKLKEAVESKKRPLRSSFLSI
SDCTST
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgggttctctggtggcgttggataagccggataccgatgctggatacaaaaagaacaaa
agcaaagaagattctgtgtcaaaaaggaaggcatctgcaactgacaagaaggaaaagaaa
cagcctgtttctgaaactattgaggatcccactgctgcacgtaaaaggcctaagcgagct
gctgcctgttcagattttaaagagaaatctgttcatttatcaaaaaatgcttcagtcatt
gaaacaaagaaggaccattgtgtagaggaagaggatgtggctattaggttaactgcgggt
ctgcaagattctgaacgaccgtgtagaagattaacggattttgtatttcacaactccgaa
ggaataccacaaccttttggaatgtctgaggttgatgatctgtttatcagtggtctcatt
ttaccacttgaggacagtcttgacaaagaaaacgcaaaaggaattagatgtgaaggcttt
gggcgtattgaagaatgggctatctctggctatgaagatggaactcctgtcatatggatc
tcaactgagacagctgattatgattgtataaaaccctcaggtagttataagaagttttac
gaccacttcttggccaaggcaacggcttgcgttgaggtttataagaagctctcaaagtca
tctggaggaaatcctgatttaagccttcacgagttgcttgcaggggttgtccgagcgatg
aatggcataaaatgcttttcaggtggtgtatccatctgggacttcgtcgtcactcagggc
gggttcatctataagcaacttattggtctggatgatacatcaaagaagactgatcaactt
tttgttgagctacctgtcctggcttctcttagagatgaaagcagtaagcaggaaacactt
gcacaaccagagcctatatcatctggtaaggctctacgtattggcccaaaagcaggcaat
ggaaaagacaagattgaagaatctggtttggctaatggtccagcgccagaagacgaagat
ctgaaattagctaaattgttgcatgaagaggagtattggcgctccttgaagcagaagaaa
ggccgcaatacatcttcctcatccagcaaaatatacatcaagatcaatgaggatgagatt
gcaagtgattatcctttacctgcatattacaaaacatctaatgaagagactgatgagtat
atcgtctttgatagtggggttgatacataccatattgatgagttgcctcgcagtatgctt
cataattgggcattgtacaactcggactcgaggctaatttctttagagctcctgccaatg
aaagcatgtgctgatattgatgtaaccatttttgggtctggagtgatgactgctgatgat
gggtctggatacaattttgacactgatgctaatcattcctcttcaggtggttctagatca
gctgagattgatggaatgccaatttacttgagtgcaataaaagaatggatgattgagttt
gggtcatcaatgatctttatatcaattcggactgatatggcctggtataggcttgggaag
ccgtcgaaacagtatgctccttggtacgaaccagtcataaagactgcgagattggcagtg
agcatcattactttgttaaaggaacaaagtcgtgtggctagactctcttttggagatgtt
attaaaagggtttcagagttcaagaaagaccatcctgcttatatatcatctaatgtagat
gttgtggaaagatatgtggttgtacacgggcaaattattctgcagcagttttctgaattt
cctgatgtaagcattaggaattgtgcatttgcaattggtctctcaaggaaaatggaagag
aggcaccataccaaatgggtgattaagaagaagaaggtgatgcagagacatgaacagaac
ttaaatcctagggcatctatgtcaccatctgtaaaaaggaaagctatgcaggctactaca
acaaggctaatcaacagaatttggggggaatactattccaattactcacccgaggtgtca
aaggaggtggttgattgtgaggtgaaggatgatgacgaagcagatgagcaggaggaaaat
gaagaggatgatgttccagaagagaacttggatgttccagagaaagctcatacaccttcc
tctacaagaaggcatattaagtcacgttctgacagcaaagaaataaactgggatagggaa
tccataggtaaaacagcttctggtgaacttttgtttaaaaaggctagagttcatggacat
gagatagctgttggggactcagttctagtggaacatgatgaaccagatgaacttccttct
atttactttgttgaatacatgtttgaaaaattggatggtagcaaaatgcttcatggaaga
atgatgcaacgaggatctgacactgtacttggaaatgcagctaatgagagagaggtattt
ttgatcaatgattgcatgaatctgcaactaggagatgtcaaagaaagtatagctgtcaat
atcagaatgatgccttggggacaccagcatagaaatgctaatgctgataaacttgataga
gcaaaagcagaagacaggaagaggaagggattgccaactgaattttattgcaaaagcttt
tatcgccctgaaagaggtgctttcttcagactcccgtttgataagatgggtcttggtaat
ggtttatgctactcctgtgagttgcagcgaactgatcaggaaaaggaatcctttaagttt
gatatgtccaactccagttttgtatatctggggactgagtattcagttgatgactttgtt
tatgtaagccctgatcactttactgcagaaagagggggaagtggcaccttcaaagctgga
agaaatgtggggttgatggcctatgtaatatgtcaattactagaaattgttggtcccaag
ggatctaaacaagctaaagtagattctacaaacgtcaaagtcaggagattcttcaggcca
gaggatatatcttcagataaggcatactcttctgatattcgggagatctattacagtgag
gaaatacatacagttcctgtggaaacaatcaaaggtaaatgtgaagtgaggaagaagtat
gatatttcatctgaagacgtccctgccatcttcgaccatattttcttttgtgaatatttg
tatgatccattgaatggatcccttaaaaagttaccagctcagataaagctgagattctca
aaaattaagctagatgatgcaacatctaggaagaggaaggggaagggaaaagaaggagag
gatgaagatggggaactgaatgaagcgtctccacagaatcgtttggccacactagatatc
tttgctggttgtggtggcttgtctgagggactgcagcattcgggtgtcacagatacaaat
tgggcaattgaatatgaagagcctgctggagatgcatttagacttaatcatccaaagaca
aaggtgttcatacataattgcaatgtgattttgagggctgtcatgcagaagtgcggagat
tctgatgactgtatctcaactccagaggcttctgaattagctgcagcaatggatgagaat
gaactgaatagtttgccactgcctggacaagttgatttcattaatggaggccctccttgt
caggggttttctggaatgaatagatttaatcagagcacctggagcaaagtacagtgtgag
atgattctggcatttttatcctttgctgattattatcggcctaagttctttctcttggag
aatgttaggaattttgtgtcgttcaaccaaaaacaaacatttcgcttaactgttgcttcc
cttcttgagatgggttatcaggttaggtttggtatccttgaagctggagcgtttggagtt
cctcagtctaggaagagagcatttatctgggctgcctccccagaggaggttcttccagaa
tggccagaaccaatgcatgtttttgctgtcccagaattaaaaatcacattatctgaaact
tcacactatgcagctgtgaggagtactgctagtggagctccattccgttcacttactgtc
agagacacaattggagatcttcctgttgttggcaatggggcatgcaagacttgtatagag
tatcaaggtgacccagtatcctggttccaaaaaaaaattcgtggcagctcaataacatta
tctgatcacatttcaaaagagatgaatgagcttaacctaatcaggtgccaaagaatcccc
aagaggccaggagctgattggcgtgaccttcaggatgaaaaggttaaactatctaatggt
caactagttgatttgattccatggtgcctgcctaacactgctaagaggcacaaccagtgg
aaggggctctttggaaggttggattgggatgggaactttcccacttccattactgacccc
cagccgatgggtaaggtggggatgtgctttcatccagagcaagacaggattgttacagtt
cgcgaatgtgcacgttcacaaggtttcccagacagctaccaatttgctggtaacattttg
cacaagcacaggcaaataggaaatgctgttccacctcctctggcatatgcacttggaagg
aaacttaaggaagctgttgagagcaagaagaggccacttagaagttcatttttgtcaatt
tcagactgtacctcaacttaa
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integrated database retrieval system
