KEGG   Solanum dulcamara (climbing nightshade): 129886845
Entry
129886845         CDS       T09577                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03020  RNA polymerase
sdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129886845
  09124 Replication and repair
   03420 Nucleotide excision repair
    129886845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129886845
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129886845
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129886845
  RNA polymerase III system
   RNA polymerase III
     129886845
  RNA polymerase I system
   RNA polymerase I
     129886845
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129886845
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 129886845
NCBI-ProteinID: XP_055817692
LinkDB
Position
4:complement(20161141..20169964)
AA seq 144 aa
MDAFHFDEIIKVLKVDADGKKYDKVSRIEAESSDGETSIQLDINSELYPMKRKELYRMVI
STTLMEGSAVTSYPPEGKSLLDKFEYIVHGLVYKVSMEGSGPDKKVVVYVSFGGLQLMLK
SDPLKAQKFKLDQKLFLLLRKMVK
NT seq 435 nt   +upstreamnt  +downstreamnt
atggatgcgtttcactttgacgaaattattaaggttctaaaggtggatgctgatggcaaa
aagtatgacaaagtttctcgcatagaagcagaaagtagtgatggtgagacatcaatccag
ctagatatcaactcagaactatacccgatgaagcgaaaagagttgtataggatggttata
tcaacgacactaatggaggggtcggctgtcactagctatcctcctgagggaaaatctctt
cttgacaaatttgaatacatcgtgcatgggttagtatataaggtctcaatggagggatca
ggacctgacaagaaagtagtggtttatgtctcctttggaggacttcagttgatgctgaaa
agtgatcccctcaaggcacaaaagtttaagcttgatcagaagctctttcttcttttgagg
aagatggtgaagtga

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