Solanum dulcamara (climbing nightshade): 129887124 Help Entry 129887124         CDS       T09577                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism sdul  Solanum dulcamara (climbing nightshade) Pathway sdul03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sdul00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     129887124  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sdul03400]     129887124 DNA repair and recombination proteins [BR:sdul03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      129887124 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor YL1 Motif Other DBs NCBI-GeneID:  129887124 NCBI-ProteinID:  XP_055818059 LinkDB All DBs Position 4:25926639..25937060 Genome browser AA seq 1309 aa AA seqDB search MAASSRRSSNGRSPLVNQQSQITAFFSKALSSPSPSPLLPKQIPEKSNPNPNTNTNPKSK PNTSISPCASPTTPSPLQGKRKITVPISAVVDLKTSYGQEVVDKRVKVYWPLDKIWYEGC VKSFDSASGEHLVKYDDGDEEMIDLAEEKIEWVKAPVRKLRRLRRSSGVEDEEKEKLEDL ESVEDDSDDEDWGKNAAKEVSGGEDVSEDMDLEIEEEDGDDVGPKSQKASGSKVVARKRK TDEGVKLTPSSSKKSRTVADKRSANRKIDSAVIGVNGKEPVATNEDSAKVSNNNNVLLCG AADRFGQRETQKFPFLGKDRKDANRRSPGGANYDPRTLYLPPNFLKGLTGGQRQWWEFKS KHMDKVLFFKMGKFYELYEMDAHIGAQELHLQYMKGEQPHCGFPEKNFSMNVEKLARKGY RVLVVEQTETPEQLENRRREMGSKDKVVRREICAVVTKGTLTEGEMLAANPDASYLMAVT ESSQTAGFQQQKRTYGVCMLDITTSRIIIGQFEDDSDCSALCCLLSELRPVEIIKPAKLL SHETERVLLRHTRNPLVNELVPLSEFWDAERTICEVKGVYRNLSSSLLSSSLNEMVTHES TASEEDGERNFLPNVLCELINLGGNGSYALSALGGALYYLKQAFLDESLLKFAKFELLPL SGFCDGTQKWHMVLDAAALENLEIFENSRNGDSSGTLYAQINHCITAFGKRMLRSWLARP LYHPESIRERQDAVAGLKGLNLPFVLEFRKELSRLPDMERLLARLFGSSEANGRNANKVT LYEDAAKKQLQEFISALRGCESMVHACSSLGAILGNTESKLLHHLLTPGKGLPDVDLVLK HFKDAFDWMEANNSGRIIPHEGVDEEYDAACEQVQEAELKLSKHLKEQRKLLGDLSIDYV TIGKDAYLLEVPESLCRSIPKEYELQSSKKGYFRYWNPVLKKLIGELSQADSEKESKLKS ILRRLIGRFCEHHNKWRELVSITAELDVLISLSIASDYYEGPSCRPNIKSVPSQDDVPVL LAENLGHPVLRSDSLDKGTFVSNNVSLGGPPNASFILLTGPNMGGKSTLLRQVCMAVILA QVGADVPASSFDISPVDRIFVRMGAKDHIMAGQSTFLTELLETASMLSLASRNSLVALDE LGRGTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRVSLCHMACQIGKG SGGLEEVTFLYRLTPGACPKSYGVNVARLAGLPDDVLQRAAAKSEELEIYGHTKQSEENP SEILKGKTATLLQNLINLVVHNKCDDNKGVVLGELNGLQNRARILLEQN NT seq 3930 nt NT seq  +upstreamnt  +downstreamnt atggccgcttcttctcgccgctccagcaatggcagatcaccgctagtcaatcagcagagc caaatcactgctttcttctccaaagccctgtcgtctccttctccttcacctcttctcccc aaacaaattccagaaaaatctaaccctaaccctaatactaatactaatcctaaatctaaa cctaatactagtatcagtccttgtgctagtcctacaactccttctcctctacaaggaaag cggaagattactgtgcccatttcagccgttgttgaccttaagacatcatatggacaagag gtagtggacaaaagagttaaggtttactggccattggataaaatctggtacgaaggctgt gtgaagtcttttgacagtgcttccggtgaacatttggttaagtatgatgatggtgatgag gaaatgattgatttagctgaagaaaagattgaatgggtcaaggcacctgtgaggaagttg aggcggttgcggagatcctccggggtggaagatgaagagaaagagaaattggaggattta gagagtgttgaggacgattcagatgatgaagattggggaaagaatgctgctaaagaagtt tctggaggtgaggatgtttccgaggatatggatttggagattgaggaagaagacggtgat gatgtaggacctaaaagtcagaaagcgagtgggagcaaagtggtggcgaggaagcggaag actgatgaaggcgtgaagttaactccgagttcgagcaagaagagtaggacagttgcagat aagaggagtgctaatagaaaaattgactctgctgtgattggagtaaatggaaaagagcct gttgcgaccaatgaggatagtgccaaggtatccaacaataacaatgtattgctgtgtggt gcggcagatagatttggacaacgtgaaacacagaaattcccattccttgggaaagataga aaggatgcaaataggaggtccccagggggcgccaattatgatccaaggactctctaccta cctcctaattttttaaaaggtttaactggtggtcagagacaatggtgggagttcaagtcg aagcacatggataaagttcttttttttaagatgggaaaattctatgagctttatgagatg gatgcacatattggagcccaggaacttcatctgcagtatatgaagggagagcaaccacat tgtggatttccagaaaagaacttctcaatgaatgtagagaagttggctcggaagggttat agggttcttgtggttgagcaaacagagacacctgaacagcttgagaatcgtcgaagagag atgggatctaaagataaggttgtcagacgtgaaatatgtgcagttgtcactaaaggaaca ttaactgagggagaaatgcttgctgcaaaccctgatgcttcatatttgatggcagtgact gaaagctctcaaactgctggattccaacagcagaagcgtacttatggtgtctgtatgctg gatataaccacaagcaggattattattggacagtttgaggatgattcagattgtagtgct ttgtgttgtctactttctgagttaagaccggtggaaataataaagccagctaaactgctt agtcatgagactgagagagtgctgctgcggcacacacgaaatccgctggtgaatgagttg gttcccctttctgaattttgggatgctgagagaacaatttgtgaggtgaagggggtatat aggaacctgagctcttcactgctgtcatcatctctaaatgaaatggtaacacatgaaagc actgcctctgaggaagatggtgaaagaaactttctaccaaatgttttatgtgagcttata aatcttggtgggaacgggagttatgcactctcagcacttggaggagctctatactacttg aagcaagcttttctggatgaatccctgctcaaatttgcgaaatttgagctacttcccctt tctgggttttgtgatggtactcaaaaatggcatatggttcttgatgcagctgcactggag aatcttgagatatttgagaacagtcgaaatggagattcttcagggacattatacgctcaa atcaaccactgtatcacagcatttgggaaaaggatgctcagatcatggcttgcaagaccc ttatatcatccagaatccattagagaacgtcaggatgctgtagctggattaaaggggctc aatctaccttttgttcttgagtttagaaaggagttatcaaggcttcctgatatggaacgg ttgcttgcacgcctcttcggtagcagtgaagcaaatggaagaaatgcaaataaagtgact ttatatgaggatgcagcaaagaaacaactgcaagagttcatatcagctttacgtggatgt gaatcaatggtgcatgcatgctcttcacttggggcgatcttgggaaacacagagtcaaag ttgctacatcatctattaacacccggcaaaggtcttccagatgtagatttggttctcaag catttcaaagatgcttttgattggatggaagcaaataactcaggtcgtattatacctcat gaaggggttgatgaggaatatgatgccgcatgtgaacaagttcaggaggctgaacttaaa ttatccaagcacttgaaggaacaaaggaaactgcttggagacttatcaatagattatgtg actataggaaaagatgcataccttttggaagtaccagaaagtttgtgcaggagcattcca aaggagtatgaattacagtcatcgaaaaagggttatttcaggtactggaatccagtcttg aagaaattaattggagagctctcacaagctgattcagagaaggaatctaagctaaaaagc attttgcggaggttgataggacggttttgtgaacatcataataagtggagagaattagtt agtattaccgcagaattggatgttttaatcagtttatcaattgcaagcgattattatgag ggaccatcatgtcgtccaaacatcaagtcagtgccaagtcaagatgacgtgccagttctt ctcgctgaaaatttaggacatcctgttcttaggagcgattctctagataaggggaccttt gtttccaacaatgtttcccttgggggtcctccaaatgccagcttcatccttttgactggt cctaacatgggagggaaatcaactcttttgcgccaagtctgcatggctgtaattttggcc caggtaggagctgatgtaccagcgtcatcatttgacatatcacctgttgatcgtatattt gtaagaatgggggccaaagatcatattatggcaggccagagtacattcttgacagaactc ttggaaactgcttcaatgctgtctttggcaagccgtaattcactcgtcgcgcttgatgaa cttggccgcggtacatctacttctgatggacaagcaatagctgaatcagttctggaacac tttgtccacaaggtgcaatgtcgaggaatgttttctacccactatcatcggttatctatt gactatcagaaagactccagggtgtcgctttgccatatggcatgccaaattgggaaaggg tccggaggtcttgaggaagttacttttctttacaggttgacaccaggtgcatgccctaaa agttatggtgtcaatgttgcacggcttgctggactccctgatgatgtgcttcagagagct gctgcaaaatctgaagagcttgagatttatggacacactaagcaatctgaagaaaaccct tctgagattttgaaaggaaagacagcaacactgctccaaaatttgataaatttggttgta cataataaatgcgacgacaacaagggtgtggttcttggtgagttgaatggactgcagaac agagcaagaatactccttgaacaaaattga

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