Solanum dulcamara (climbing nightshade): 129895840
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Entry
129895840 CDS
T09577
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
sdul03013
Nucleocytoplasmic transport
sdul03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129895840
03008 Ribosome biogenesis in eukaryotes
129895840
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129895840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129895840
03009 Ribosome biogenesis [BR:
sdul03009
]
129895840
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129895840
03036 Chromosome and associated proteins [BR:
sdul03036
]
129895840
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129895840
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129895840
Pre-60S particles
129895840
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129895840
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129895840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
129895840
NCBI-ProteinID:
XP_055827585
LinkDB
All DBs
Position
7:14318143..14334969
Genome browser
AA seq
1075 aa
AA seq
DB search
MAAEKLRDLSQPIDVSLLDATVAAFYGTGSKEERAAADHILRDLQNNPDMWLQVVHILSS
TQSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSSDEASLRRDRLYISK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESTLLEI
LLKFFPVPSYRNLTLQCLTEIAALNFGDFYNEQYVKMYTIFMVQLQSVLPPNTNIPEAYA
NGSNEEQAFIQNLALFFTSFFKSHIRVLESSQENISALLLGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAAHHNLDNPAMTANMMGLQMPLLPGMTDGLGAQLMQRRQLYSGPMSK
LRLLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLKKLSNQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVVVQVGENEPFVSELLTTLPTTIADLEHHQIHTFYESVGQMIQAEPDPQKRDEYLQ
RLMELPNQRWNEIIGQARQSVDYLKDQDVIRAVLNILQTNTSAASSLGTYFLPQITLIFL
DMLNVYRMYSELISTSIAQGGPYASRTSIVKLLRSVKRETLKLIETFLDKAEDQPHIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIEDVPRIFEAAFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFAALIRLSSEQLKLVMDSIIWAFRHTERNIAETGLN
LLLAMLKNFQNSEFANQFYRTYYLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCMVVML
SEPLWDASTVPCPYPNNVEFVREYTIKLLSTSFPNMTSAEVTQFVSGLFDSTNDLPTFKN
HIRDFLVQSKEFSAQDNNDLYAEEAAAQRERERQRMRSIPGLIAPNEIQDEMVDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagctaagagatttgagtcagcccattgatgtttcgttgcttgacgct
actgttgccgctttctatggcaccggatctaaggaagagagagctgcagcggaccatatt
ttgcgtgatttgcaaaataacccagatatgtggcttcaagtggttcacattctatcgagc
acacaaagcctgaatactaagtttttcgctttgcaggttctagaaggtgttataaagtat
agatggaatgcattgcctgtcgaacaacgagatggaatgaaaaactatatttctgaagtt
attgtgaagctttccagtgatgaagcatctcttcggcgggacaggctgtatattagcaag
ctaaacataatattggttcagattttgaagcacgagtggcctgcaagatggcgaagcttc
attcctgacttagttgcggctgcaaaaacaagcgaaacaatatgtgaaaactgcatggcg
atattgaagcttctcagtgaggaggttttcgatttctcgaggggtgaaatgactcaacaa
aagatcaaggagctcaaacaatctttaaacagcgagtttcaactcatccatgagctatgc
ttgtatgtgctatcagcatctcaaagaactgagctcatcagggctacgcttgctaccctg
catgctttcctttcatggattccacttggctatatttttgaatcaactctgttggaaatt
ctgcttaaatttttccctgtgccatcttatcgcaacctcacacttcagtgtctaacagag
attgctgcccttaattttggggatttttataacgaacagtatgtcaagatgtacaccata
ttcatggtgcagttgcagagtgttcttcctcccaacactaacattcctgaggcctatgca
aatggaagcaacgaagaacaggcattcattcaaaatctggctttgttttttacatcattt
tttaagtctcatatacgtgtgctagaatcatcacaagagaatataagtgccctcttgttg
ggacttgagtatcttattaatatctcgtatgtggatgatacagaggtttttaaggtttgc
ttggactactggaattccttagttcttgagctgtttgaagcagcacatcataatctagat
aatcctgcaatgactgcgaacatgatgggccttcagatgccactacttcctggcatgact
gatggtcttggagcgcaacttatgcagaggagacaactttattctggtccaatgtccaag
ttgaggttacttatgatatctcgcatggcaaaacctgaagaagttctcattgttgaagat
gaaaatgggaacattgtccgtgaaacaatgaaggacaatgacgtccttgtgcaatacaag
atcatgagggaaactctgatctacttgtcacatcttgatcatgacgatacggaaaagcag
atgctgaagaaacttagcaaccaacttaatggtgaggactggtcgtggaacaatctaaat
acattatgttgggcaattggttccatatctggttcaatggtggaggagcaggagaacaga
ttccttgtcatggttatacgcgatttgctaaacctatgtgaaatcacgaaaggaaaagac
aacaaggccgtaattgcaagtaatataatgtatgtagttgggcaatatcctagatttttg
agagctcattggaagttcttgaagactgttgtgaacaaattgtttgagttcatgcatgaa
acacatcctggagtgcaggatatggcctgtgatacatttttgaaaatcgttcagaaatgc
aagcgcaagttcgttgtagtccaggttggagaaaacgagccatttgtctcagaactttta
accactcttcccacaactattgcagatttagaacatcatcagattcataccttctacgaa
tctgttggtcaaatgattcaagcagaacctgatcctcaaaaacgagatgagtatctgcag
aggttgatggagcttccaaatcagagatggaatgaaattataggacaagcacgacaaagt
gtggactacctgaaagatcaagatgttattcgagctgttctaaatatattgcagacaaat
actagtgctgctagctcacttggaacttatttcttacctcaaattaccctgatcttcttg
gatatgctcaatgtttatagaatgtacagtgagcttatatctacaagcatcgcacaagga
gggccctatgcctcaaggacatccattgtgaaactcttgcgctcggtaaaaagggaaacg
ttaaagcttattgaaacatttttggacaaggccgaagatcaaccacacattgggaaacaa
tttgtgccaccgatgatggacccagttttaggtgactatgcaaggaatgtgcctgatgct
agggaatctgaagttctctctcttttcgctacaattataaacaagtacaagggtgctatg
attgaggatgtccctcgaatatttgaagctgctttccaatgtactctagagatgatcacc
aaaaactttgaagattatccggagcatcggctcaagttcttttcattacttcgtgcaatt
gctacacattgttttgctgctttaatacggctgtcaagtgagcaattaaaacttgtcatg
gattctataatatgggcgtttcggcacactgagaggaacattgctgaaaccgggcttaat
ctcttgctggcaatgctgaaaaattttcagaattctgagtttgctaaccagttttatagg
acttactatttgacgatcgagcaagaaatttttgctgttctgacagacacgtttcataag
cctgggtttaaattgcatgttttggtgctacagcatttattttgcatggtggttatgttg
tctgagcctctatgggatgcatcgacagtgccttgtccatatccaaataatgttgaattt
gttcgtgaatacaccattaagcttcttagtacatccttccccaacatgacatctgctgaa
gtgactcaatttgtcagtgggctatttgattcaacaaatgaccttcccacattcaagaat
cacataagggacttccttgtgcaatcgaaagagttctctgctcaggacaataacgacctt
tatgctgaggaagcagctgctcagagagagagggaacgtcagcggatgcgttctattcct
ggtctaattgcacctaatgagatccaagatgaaatggtggattcatga
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integrated database retrieval system
