KEGG   Solanum dulcamara (climbing nightshade): 129895945
Entry
129895945         CDS       T09577                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03020  RNA polymerase
sdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129895945
  09124 Replication and repair
   03420 Nucleotide excision repair
    129895945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129895945
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129895945
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129895945
  RNA polymerase III system
   RNA polymerase III
     129895945
  RNA polymerase I system
   RNA polymerase I
     129895945
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129895945
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 129895945
NCBI-ProteinID: XP_055827710
LinkDB
Position
7:76943208..76951777
AA seq 145 aa
MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKEKFMMVL
ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM
QLRGDPSIAAKFELDQKIFLLIRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgaaactcttttcgaagatatatttacagtcactcagaaagatcctgacggaaaa
aaatttgatcgagttaatcgcattgaagcacggagtgagcagtttgatatgttcatgcta
ctggatataaacactgaaatatatcccatgcgcgtgaaggagaaatttatgatggttcta
gcatctactttgaacttggatgggactccagatactggttattttattcagggtaacaag
aaatcgcttgctgacaagttcgaatatgtcatgcatgggaagctatataggatctcagaa
gaaggttcggggaagcacgttaaagcagacatttttgtttcatttggaggacttctgatg
cagctgagaggagatccatccattgcagctaagtttgagcttgatcagaagattttcctt
ctcataaggaaggtttga

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