Solanum dulcamara (climbing nightshade): 129899370
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Entry
129899370 CDS
T09577
Name
(RefSeq) probable CoA ligase CCL8 isoform X1
KO
K18660
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00061
Fatty acid biosynthesis
sdul00280
Valine, leucine and isoleucine degradation
sdul01100
Metabolic pathways
sdul01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
129899370
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
129899370
Enzymes [BR:
sdul01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
129899370
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Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6305
Motif
Other DBs
NCBI-GeneID:
129899370
NCBI-ProteinID:
XP_055830328
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Position
1:72865638..72873185
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AA seq
601 aa
AA seq
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MSALKFLNYFLSSKFAPLHSSYIQYRFSSPKYHSFISSQLRLLSSATSSISYMELVKEVA
SKGPESQKNIAIRADEKSYSYLQLISSARRISNLLSKLELKTDKGIKENVHHNGARVGIV
AKPSAEFVAGILGTWLSGGCAVPLALSYPESELLHVMNDSDVSIILSTEDHQELMNTIAA
KTGAQLSLIPSIPDVHSSTEHDQSKDMVSDGQQDLLEINSYGENPAFILYTSGTTGKPKG
VVHTHNGVLAQVQMLANAWEYTSKDQFLHSLPLHHVHGLFNALLAPLYAGSTVDFVPKFS
VRGIWQRWRESYPTDGTIMDNAITVFTGVPTMYARLIQGYEAMDPELKTASASAARHLRL
MMSGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPIRGKCKGGTVGKPFPGVQAK
ILLEDESSNDKSGVGELCIKSPSLFKEYWKLPEVTKQSFTDDGYFKTGDTVTVDEDGYYI
ILGRTNADIMKVGGYKLSALEIEAVLLEHQAIAECCVLGLPDRDYGEVVCAIVVPAAEVK
RRRDEELKPALTLHELSDWGKEKLAPYKIPTRLFLWESLPRNAMGKVNKKELKRKLADDP
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattgaaatttctcaactacttcctcagttctaaatttgcacctcttcactct
tcatatattcagtatcgtttttcgtctccaaaatatcatagctttatctcctcccaactt
cgcctcttatcctctgctacaagtagcataagctatatggagctggtcaaggaagttgcc
agcaagggacctgaatcgcagaagaatattgcgataagagctgatgaaaagagctacagt
tacctgcagttgatatcatctgcgaggaggatttcaaatttgttaagcaaactagagctt
aaaactgacaaaggcatcaaagaaaatgtacatcacaatggagcaagagtagggattgtg
gccaaaccttctgctgagtttgttgctggaatactagggacctggcttagtggaggttgt
gcagtccctcttgctttgagctaccctgagagtgaactgctacatgtgatgaatgactcg
gacgtctctataattttgagcactgaagaccaccaagaacttatgaatacaattgcagca
aaaactggtgctcagttatctctcattccttcaattcccgatgtgcattcatcaacagag
catgaccagtcaaaagacatggtttctgacggtcaacaggatctgctagaaatcaattcc
tacggcgagaaccctgcttttatcttgtacaccagcggcacaacagggaaaccaaaagga
gttgtccacacacacaatggagtcttagcacaggtccaaatgttagctaacgcatgggaa
tacacgtccaaggatcaatttttgcacagtctaccactccatcatgtgcacggacttttc
aatgctttacttgcccctctttatgcaggttccacggtcgactttgtgccaaaattcagt
gtgaggggaatttggcagagatggcgtgaatcatatcctacagatgggactattatggat
aatgccattacggtgtttactggagttccaactatgtatgcacgattgatacaaggttat
gaagcaatggatccagaactaaaaacagcttctgcttcagcagcaaggcacttgcgtctt
atgatgagtggctcctctgcacttcctctgcccgtcatgcagcagtgggaaaccattact
ggacaccgcttattggaacgttatggcatgactgagtttgtgatggcaatctctaatccc
ataagaggcaagtgcaaaggaggtactgttggcaagccatttccaggtgtgcaggccaag
attcttttggaagatgaaagtagtaatgacaaaagtggagttggagagctgtgcattaag
agtccatcattgttcaaagaatactggaaattacctgaggtaaccaagcagtcatttact
gatgatggatatttcaagactggagatactgttacagttgacgaagacggatattacatc
attttgggacgtacaaatgctgacattatgaaggttggtggatacaaattatcagcattg
gaaattgaagcagttctgttagagcatcaagctatagcagagtgttgtgtgttaggcttg
cctgacagagattatggcgaagtggtatgtgcaatagttgtgcctgcggctgaagtaaaa
agaagacgagatgaggagctaaagcctgcactaaccttgcacgaactttctgattggggc
aaggagaaacttgccccatacaagataccaactcgtctgtttctgtgggaatctctgcct
cgaaatgctatggggaaggtaaataagaaagagctgaaaaggaagctggctgacgatccc
aaatga
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