Solanum dulcamara (climbing nightshade): 129900779
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Entry
129900779 CDS
T09577
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129900779
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129900779
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129900779
03036 Chromosome and associated proteins [BR:
sdul03036
]
129900779
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129900779
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129900779
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129900779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDS5
Htt_N-HEAT_1
CLASP_N
SCD
Adaptin_N
Cnd1
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
129900779
NCBI-ProteinID:
XP_055831798
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All DBs
Position
8:70582000..70590151
Genome browser
AA seq
581 aa
AA seq
DB search
MSGIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGMFIPYVGGVEHARVLLPPLEGLGSVEETCVREKAVESLCRIGSQMKES
DLVESFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEPLKNELRTIYSQLCQDDMPMVR
RSAATNLGKFAATIEQPHLKTDIMSMFETLTQDDQDSVRLLAVEDCAALGKLLEPKDCVA
QILPVIVNFAQDKSWRVRYMVANQLYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPTWAMEHIIPQV
LDMISDPHYLYRMTILHAISLLAPVMGSEITCSKLLPVIITASKDRVPNIKFNVAKVLQS
VIPIVEQSVVENTIRPCLVELSEDPDVDVRFFANQALQATK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtattgatgagccgttgtatcctattgcggttttgattgatgagttgaagaat
gaagacatccagcttagattgaattcaatccggcgattgtctaccatcgcccgtgctctt
ggtgaggagagaactcggaaagagttgattccatttctaagtgagaacaacgatgacgat
gacgaagttcttcttgcaatggccgaagagttgggcatgtttattccatatgttggaggg
gttgaacatgcgcgtgtattgcttccacccttggaaggtcttggtagtgttgaagagact
tgtgttagggaaaaggcagttgagtcactatgcagaattgggtctcaaatgaaggaatcg
gacttggtggagtcatttattccgcttgtgaagagactggctgctggagagtggtttact
gctcgagtttcctcctgtggattgtttcacattgcctatcctagtgctccagagccatta
aagaatgaacttagaaccatctatagccaactttgccaagatgatatgcctatggtgagg
agatcagctgctacaaatcttggaaagtttgctgcaactattgaacaaccccatttgaag
actgacatcatgtcaatgtttgagacactgacacaggatgatcaagattctgtccgttta
ttggctgttgaggattgtgctgctttggggaagctgctcgagcctaaagactgtgtagca
caaattctgcccgtcatagttaattttgcgcaggataagtcttggcgtgttcgttacatg
gttgcaaatcaactttatgaactttgtgaggcagttggaccagaggctaccagaacggat
ttggtccctgcctatgttcggctacttcgtgataatgaggctgaagtgcgtatagctgct
gctggcaaggtgactaagttctgccgtattttgagtcctgagcttgctatccagcatatc
cttccttgtgtgaaggaactatcatcagattcatcccagcatgttcgttctgctttggct
tcagttatcatgggaatggctcctattttaggaaaggatgcaactatcgagcagcttctc
ccgatttttctctctcttctgaaggatgagtttcctgatgttcgtttgaatatcatcagt
aagcttgatcaagtaaaccaggtaattggaattgatttgctctcccaatcactgctgcca
gctattgttgaacttgcagaggatagacactggagggttcggcttgcaataattgagtac
atacctctattggcaagtcagctgggggttggcttttttgatgacaagcttggtgctcta
tgcatgcaatggctaaaagataaggtttactctattagagatgcagcagcaaacaatgtt
aagcgccttgctgaggaatttggtccaacatgggcaatggagcatataattccacaggtg
ttggatatgattagtgacccacactatctttaccgaatgaccatccttcatgcaatttct
cttcttgcccctgtcatgggctcagaaattacttgctccaaacttcttccggttataatt
actgcatcaaaagacagggtaccgaatatcaagttcaatgtggctaaggtgttgcagtct
gttattccaatagttgaacaatctgttgtggagaacacaattcgaccatgtttggttgaa
ctcagcgaggacccagatgttgatgttaggtttttcgccaaccaagccctacaagcaacc
aagtga
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