Solanum dulcamara (climbing nightshade): 129901340
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Entry
129901340 CDS
T09577
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129901340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129901340
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129901340
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129901340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
Motif
Other DBs
NCBI-GeneID:
129901340
NCBI-ProteinID:
XP_055832464
LinkDB
All DBs
Position
8:13867898..13879022
Genome browser
AA seq
689 aa
AA seq
DB search
MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRVVHRGASFAGLRTTSVRKLLPE
SWGCRCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMWMSILSVLIAIGMTPA
SPKLVQAGPPELLSVLLDGRIAGYMPSDLIENVVTHLRRLKLSSTSSIPVDLEVGYIPLS
INGAYPGLYLFTSPSRFVRPVRIIFAPAEEGNDLELIGPFEQVYMEISCPDGGDGGRKTL
FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMRFFSQALNCPADQKLYH
LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVYRGMCHGHI
YQTETIDLTEQSAKSYRAQRLFRRSNLDKSSHQLIDSDGLPYVGQANVRFRRSRNPVIGD
KFSSRHGQKGVCSQLWPDIGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFV
DATPFSNTMKEAESEFSSLVDELGSMLTACGFNQHGVEVLYSGVYGTELTCEIFIGPVYH
QRLRHVVSDKFQVRSTGQVDQITRQPLKGRKRGGGVRFGEMERDSLLAHRAAYLLHDRLH
TSSDHHIADVCSECGSVLTSSLFQPPKRAVQADLKLPPAREPKKVTCVACLSSKGMETVA
MPYVFKYLAAELAAMNIKMTLKLSNGAGA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagactgggagattggctacacaatcaggtcttgatttgcagcagagagctggt
atgactgtccaggcagaaaagttaaatttcctccgtttcctttcacattttcgagtggtt
catcgaggtgcctcatttgctggtcttcgtactacaagtgtgcggaagttgttacctgaa
tcttggggttgccgttgtcctgttcatacacctgatggggagccatgtgggttgcttaat
catatgactgcatcttgccgcataacctcatactatgattcgaagggcaatgttaaagac
ttcttcaaaatgtggatgtccatactgagtgtgctgattgcaattggaatgacaccagca
tcaccaaagcttgtgcaagctggtcctcctgaattgctgtctgttctactggatggtcgt
attgcgggctatatgccatcggatttaattgaaaatgttgttacccacttgcggagattg
aaattgtcatcaacatcatcgattccagttgatttggaggttgggtacatccctttgagc
attaatggagcatatccaggcctatatctgttcacatctccttctaggtttgttcgtcct
gtaagaattatctttgcacctgctgaagagggcaatgatcttgaactcattggacccttt
gaacaggtgtatatggagataagctgtccggatggtggagatggaggaaggaaaacctta
ttccctgccacacatcgagaaattcatccaactaatattttgagtgttgttggcaatctt
acaccttggtctgatcataatcagagtccacgtaatatgtatcagtgtcagatgggtaaa
caaacaatgcgtttcttctcacaagcattaaattgtcctgctgatcaaaagttatatcac
cttcagactcctcaaactccaattgtacgcacaaaagcttatgagaagtactgtgttgat
gactatccattaggaacaaatgcaattgtggcagttttggcttattcaggatatgacatg
gaggatgctatggtcttaaataaatcatctgtatatcgtggtatgtgtcatgggcatata
taccagacagaaaccattgacttgactgagcaaagtgccaaatcttatcgtgctcagaga
ttgtttagaagaagcaatttggataagtcgtctcatcagctgattgattctgatggtctt
ccatatgtggggcaggcgaatgtacgttttaggcgctccaggaatcctgtaattggtgat
aaatttagcagccgacatgggcaaaagggtgtttgctctcaattatggcctgatattgga
gttacaggaatgaggccagatcttattattaatcctcatgctttcccttcaaggatgacg
attgctatgctgttggagtcaattgctgctaagggaggtgctttacatgggaagtttgtt
gatgcaacgccattttctaacacaatgaaggaagcagaatcagaattcagttcactggtg
gatgaacttggttccatgttaacggcttgtggcttcaatcagcatggtgtagaagtacta
tatagtggagtatatgggacagaactgacgtgtgaaatatttattggacctgtttatcat
cagcgtttgcgacacgtggtttccgataaatttcaggtccgttctactggacaagtagac
cagatcactcggcagcctctcaaggggcgaaagcgtggtggaggtgtccgctttggtgaa
atggaacgagattcactccttgctcatcgagcagcatatttgctgcatgatagactccat
accagctcagatcatcacattgcagatgtgtgctctgaatgtggaagtgtcctaacatca
tcattatttcagccgccaaaacgagcagtgcaagcggatttgaaactgccacctgctaga
gaacccaaaaaggttacttgtgttgcttgcctttcaagtaaaggaatggagactgttgca
atgccgtacgtgtttaaatatctagcggctgaactggcagcgatgaacatcaagatgacc
ctcaaactaagtaatggggctggagcttga
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