Solanum dulcamara (climbing nightshade): 129902657
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Entry
129902657 CDS
T09577
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
sdul04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129902657
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129902657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129902657
Enzymes [BR:
sdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
129902657
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
129902657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
nSTAND1
AAA_22
FtsK_SpoIIIE
Mg_chelatase
AAA_18
Motif
Other DBs
NCBI-GeneID:
129902657
NCBI-ProteinID:
XP_055833991
LinkDB
All DBs
Position
1:16318747..16346205
Genome browser
AA seq
1343 aa
AA seq
DB search
MPSLQLLQLTEHGRGLLASKRKALLLTTGIIVAGGTAAAYMQSRRTYNGHDSMQSNGVDD
GVIEPNKKIGKGNNVKKSRQKKGGLKSVKVLAAILLSRMGRMGTRDLFALVATVVLRTAV
SNRLAKVQGFLFRAAFLRRVPMFLRLILENILLCFLQSALHSTSKYITGTLSLRFRNILT
RLIHAQYFQDMVYYKLSHVDGRITNPEQRIASDVPRFSKELSDLVQEDLIAVTDGLLYTW
RLCSYASPKYLFWILAYVLGAGLTIRNFSPPFGKLMSKEQQLEGEYRQLHSRLRTHAESI
AFYGGETREDFHIQQKFKTLVRHMKAVLHEHWWFGMIQDFLHKYLGATVAVVLIIEPFFS
GNLRPDASTLGRAEMLSNLRYHTSVIISLFQALGTLAISSRRLNRLSGYADRIHELMVIS
RDLGGRNASSVQSNGSSNYVTEANYIEFDGVKVVTPSDNVLVEDLSLRVESGSNLLITGP
NGSGKSSLFRVLGGLWPLVSGHIVKPGIGSDLNKEIFYVPQRPYTAIGTLRDQIIYPLTA
DQEVEPLTRSGMVELLKNVDLEYLLDRYPPEKEVNWGEELSLGEQQRLGMARLFYHKPKF
AILDECTSAVTTDMEERFCSKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWRVHYKR
AEAPSLADSEFNNDQHNETDRQSDAMTVQRAFATAKKGTKFSKSEAELYFSELILASPSE
DDESPLLVFPHLKSVPRILPLRIAAMSKVLVPRLLDKQGAQFLAVALLVVSRTWVSDRIA
SLNGTTVKFVLEQDKAAFLRLIVISVLQSAASSFIAPSLRHLTQTLALGWRIRLTKHLLK
NYLRNNAYYKVFNMSGVNLDADQRLTQDLEKLTADLSSLVTGMVKPTVDILWFTWRMKLL
TGQRGVAILYAYMLLGLGFLRCVTPDFGDLASQEQQLEGTFRFMHERLRTHAESVAFFGG
GAREKEMVEARFKELLHHSSLLLKKKWLFGIIDEFITKQLPHNVTWGLSLLYAMEHKGDR
ALTSTQGELAHALRFLASVVSQSFLAFGDILELHKKFVELSGGINRIFELEEFLDAAQYD
VPEGVSSSRSSEDLISFSEVDIITPGQKILARKLTCDIEKGKSLLVTGPNGSGKSSIFRV
LRGLWPVVSGKLAKPCQPLNSELGSGIFYVPQRPYTCLGTLRDQIIYPLSHEVAEKRVQA
MREGLRHLGSSNILDSHLQSILEDVKLVYLLEREGGWDANQNWEDILSLGEQQRLGMARL
FFHKPRFGILDECTNATSVDVEEHLYRLAKEAGITVVTSSQRPALIPFHSLELRLIDGEG
KWQLRSIKMDEGEGKPNEYTQQL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcagcttctgcagttgactgaacatgggcgagggcttctggcttctaaa
aggaaagctctgctgcttacgacgggtataattgttgctggtggaacagctgccgcatac
atgcagtcacggagaacctataacgggcatgattctatgcagtccaatggagtggatgat
ggtgtaatagagccaaataagaagattggaaagggtaataatgtgaagaaaagcaggcaa
aagaaaggaggtttgaagtccgtaaaagttttagcagccattctgctatctcgaatgggc
agaatgggtacaagagatctgtttgctctggtagccacagtggtgttacgaactgcagta
agcaaccgattggcaaaagtgcaggggtttctttttcgtgctgccttcctccggcgtgtg
ccaatgtttttgcgcctcatacttgaaaatattttgttgtgtttcctccagtcagccttg
cactcaacctctaaatatataactgggaccttgagtttacgcttccggaatattttaaca
aggcttattcatgcacaatattttcaggatatggtgtactataagctgtcccatgttgac
ggtcggattacaaatccagaacagagaattgccagtgatgtacccaggttctctaaagag
ctgagtgatcttgtacaagaggatctcatagctgtcactgatggacttctatatacttgg
cgcctgtgttcgtatgcaagtccaaagtatcttttctggattttggcctatgtcctaggt
gcagggcttactattagaaatttctcacctccattcgggaaactaatgtcaaaagaacag
caactggaaggggaatacagacagcttcactcacgattaaggacccatgcagaaagcata
gcattttatggtggtgaaactagagaagatttccacattcaacagaagtttaagactcta
gttcggcacatgaaggccgttcttcatgagcactggtggtttgggatgattcaggatttc
ttacacaagtatcttggtgctacagttgctgttgtcttgattattgagcccttcttctct
ggcaatttgagacctgacgcatccacattgggacgagcagagatgttgagtaacttgaga
tatcacaccagtgtcataatatccttattccaggcattgggaacccttgcgataagttca
agacgactcaatcgtctaagtgggtatgcagatcgtattcatgagctcatggttatttct
agagatttaggtggacgcaatgcctcttccgtacaatctaacgggagtagtaattatgtc
actgaggcaaattacattgagttcgatggggttaaggttgttactcctagtgataatgtg
ttggtagaggacttgagcctaagggttgaatcagggtctaatcttttgataacaggtcca
aatggtagcggcaaaagctcactttttcgagtccttggaggtctttggccacttgtttct
ggccatattgtaaaacctggaattggttctgatctgaataaggagatcttttatgttcct
caacgtccatatacagctattggaacactacgtgaccagattatatatcctttgactgct
gatcaagaggttgaacctctcacacgaagtggcatggttgaacttcttaaaaatgttgat
cttgagtatcttctggatcgctatcctcctgaaaaggaggtaaactggggtgaagaatta
tctctgggagagcaacaaagattggggatggctagacttttctaccataaaccgaaattt
gccattctggatgaatgtacaagtgctgtgacaactgatatggaggaacgcttttgttca
aaagtaagagcgatgggaacatcatgtatcactatttctcaccgtcctgcgttggttgca
tttcatgatgtcgtcttgtccttggatggtgaaggaggctggagggttcactataagagg
gcagaggctcccagtctcgctgactcagagttcaataacgaccagcataatgagacagat
cgtcaaagtgatgcaatgaccgtgcagcgtgcatttgcaactgcaaaaaagggcacaaaa
ttctccaagtcagaggctgaattgtatttttcggagttgatattagcatcgccatctgaa
gatgatgaatctcccttgcttgtctttccacatcttaaaagtgttccaaggatacttcca
ctgagaattgctgccatgtctaaagttctggtacccagactgctagataaacagggggca
cagttcctcgcagtcgctttacttgtggtgtccagaacatgggtttctgatcgcattgcc
tctttaaatggaacaactgtgaaatttgtcctggagcaagataaggcggcattcctacgt
ttgattgttattagtgtccttcagagtgctgcgtcctcctttattgcaccgtctctgagg
cacttgacgcagacactggcacttggatggaggattcgtttgaccaagcacttgttgaag
aactacttaagaaataatgcatattataaggtatttaacatgtcgggtgtcaacttggat
gcggatcagagattaactcaagatctggagaagctaaccgctgacttgtctagtctggta
actggaatggtgaagccaactgttgacattctatggttcacatggagaatgaaactgcta
actggccagaggggagttgcaatattatatgcttacatgttattaggtctgggtttcctg
agatgtgttactcctgactttggtgacctggcaagtcaagaacaacagcttgaaggaact
ttcaggttcatgcatgaaaggttgcgaacacatgctgaatctgttgctttctttggaggt
ggtgctcgtgaaaaagagatggttgaagcaaggtttaaagaacttcttcaccactcttct
ttgcttcttaagaagaaatggttatttggcataatagatgagttcatcacgaagcagctt
cctcacaatgttacttggggattgagccttttgtatgctatggagcacaagggcgaccgg
gctttgacttcaactcaaggtgaactcgctcatgcactacgatttttagcgtctgttgtg
tctcaaagctttttagcttttggtgacattcttgagctccacaaaaaatttgttgagctt
tctggtggtatcaatagaatttttgagctggaagagtttctcgatgctgctcaatatgat
gtacctgaaggtgttagttcatcgcgttcctctgaggatctaatttctttctctgaagta
gacatcattacaccaggacaaaaaatcttggctaggaagctaacatgtgatatagagaag
gggaaaagccttcttgtaactggccctaatggaagtggaaagagttcaatcttcagagtc
cttcgtggtttatggccagttgtgagtggaaaactagctaaaccatgtcagcctcttaac
tcagaattaggcagtggcatcttctatgtacctcaacgaccatatacgtgcttaggaacc
ctacgggatcaaattatatatcctctctcacatgaagtggctgagaaaagggtacaggct
atgcgagaaggtctcagacatctagggtcttctaacattttggattctcatttgcaatca
attctcgaggatgttaaattagtctaccttttagaaagagaaggtggctgggatgccaac
cagaactgggaggacatcctatctcttggagaacaacaacgattaggaatggcacgctta
ttttttcacaagccacggtttggaatccttgacgaatgtacaaatgctacaagtgttgat
gttgaagagcatctttataggcttgctaaggaagctggcattactgttgttacatcctca
cagcgtcctgctttaatacctttccattctctggaattacggttgattgatggtgaaggc
aagtggcaactgcgttcaattaagatggatgagggggaaggcaaaccaaatgaatacaca
caacaattgtga
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