Shigella dysenteriae Sd197: SDY_0307
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Entry
SDY_0307 CDS
T00306
Symbol
yajK
Name
(GenBank) putative oxidoreductase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00730
Thiamine metabolism
sdy01100
Metabolic pathways
sdy01240
Biosynthesis of cofactors
sdy04122
Sulfur relay system
Module
sdy_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SDY_0307 (yajK)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SDY_0307 (yajK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdy03016
]
SDY_0307 (yajK)
Enzymes [BR:
sdy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SDY_0307 (yajK)
Transfer RNA biogenesis [BR:
sdy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SDY_0307 (yajK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
ABB60526
ShiBASE_China:
SDY0307
UniProt:
Q32JI1
LinkDB
All DBs
Position
complement(298737..300185)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR
LTIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRSGKHDFS
SIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI
EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNDCGPNDVILDIRSVDEQE
DKPLKVEGIDVVSLPFYKLSTKFGDLDQNRTWLLWCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgcttg
cgctttataaaaatccttaccgggaacattcgtaacgttttaaagcactatgatgagacg
ctcgctgtcgtccgccactgggataacatcgaagttcgcgcgaaagatgaaaaccagcgt
ctgactattcgcgacgccctgacccgtattcctggtatccaccatattctcgaagtcgaa
gacgtgccgtttaccgacatgcacgatattttcgagaaagcgttggttcagtatcgcgat
cagctggaaggcaaaaccttctgcgtacgcgtgaagcgcagtggcaaacatgattttagc
tcgattgatgtggaacgttacgtcggcggcggtttaaatcagcatattgaatccgcgcgc
gtgaagctgaccaatccggatgtgactgtccatctggaagtggaagacgatcgtctcctg
ctgattaaaggccgctacgaaggtattggcggtttcccgatcggcacccaggaagatgtg
ctgtcgctcatttccggtggtttcgactccggtgtttccagttatatgttgatgcgtcgc
ggctgccgcgtgcattactgcttctttaacctcggcggcgcagcgcatgaaattggcgtg
cgtcaggtggcacattatctgtggaaccgctttggcagctcccaccgcgtgcgttttgtc
gctattaatttcgagccggtcgtcggggaaattctcgagaaaatcgacgacggtcagatg
ggcgttatcctcaaacgtatgatggtgcgtgccgcgtctaaagtggctgagcgttacggc
gtacaggcgctggtcaccggcgaagcactcggccaggtgtccagccagacgctgaccaac
ctgcgcctgattgataacgtctctgatacgctgatcctgcgtccgctgatttcttacgac
aaagagcacatcatcaacctggcccgccagattggcactgaagactttgcccgtactatg
ccggaatattgcggtgtgatctccaaaagcccgacggtgaaagcggttaaatcgaagatt
gaagcggaagaagagaagttcgacttcagtattctcgataaagtggttgaagaagcgaat
aacgttgatatccgcgaaatcgcccagcagaccgagcaggaagtggtggaagtggaaacc
gtcaatgactgcggcccgaacgacgtgattctcgatatccgttctgtcgatgaacaggaa
gataagccactgaaagtcgaagggattgatgtggtttctctgccgttctataaactgagc
accaaatttggcgatctcgaccagaacagaacctggctactgtggtgtgaacgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttaacaatgtgaaggtatat
cgcccgtaa
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