Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B2219
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Entry
SeAg_B2219 CDS
T00751
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sea
Salmonella enterica subsp. enterica serovar Agona SL483
Pathway
sea00521
Streptomycin biosynthesis
sea00523
Polyketide sugar unit biosynthesis
sea00541
O-Antigen nucleotide sugar biosynthesis
sea01100
Metabolic pathways
sea01110
Biosynthesis of secondary metabolites
sea01250
Biosynthesis of nucleotide sugars
Module
sea_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SeAg_B2219 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SeAg_B2219 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SeAg_B2219 (rfbC)
Enzymes [BR:
sea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SeAg_B2219 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACH49507
UniProt:
B5EXS1
LinkDB
All DBs
Position
complement(2132984..2133532)
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AA seq
182 aa
AA seq
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MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKSKKNVLRG
LHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHG
FVTLSDYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKDAAAPLLHQALL
TE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgattaaaacagcaataccagatgtcttgatcttagagcctaaagtttttggc
gatgagaggggattcttttttgaaagttataaccagcagacctttgaagagtctattgga
cgtaaagttacatttgttcaagataatcattcaaaatccaaaaagaacgtactcagaggg
ctgcattttcagagaggagaaaatgcacagggtaagttagttcgttgtgctgtcggtgag
gtttttgatgttgcggtcgatatccgaaaagagtcgcctacttttggtcagtgggttggc
gtaaatctgtctgctgagaataagcgacagctttggattccagaaggttttgctcatggt
tttgttactcttagtgattatgcagaatttctgtacaaagcaactaattattactcacct
tcatcagaaggtagcattctatggaatgatgaggcaataggtattgaatggcctttttct
cagctgcctgagctttcagcaaaagatgctgcagcacctttactgcatcaagccttgtta
acagagtaa
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