Staphylococcus edaphicus: MNY58_02345
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Entry
MNY58_02345 CDS
T09108
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
seda
Staphylococcus edaphicus
Pathway
seda00190
Oxidative phosphorylation
seda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
MNY58_02345
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNY58_02345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seda03019
]
MNY58_02345
Enzymes [BR:
seda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
MNY58_02345
Messenger RNA biogenesis [BR:
seda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MNY58_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UQW81969
LinkDB
All DBs
Position
complement(551877..554036)
Genome browser
AA seq
719 aa
AA seq
DB search
MHRNLGDKDLNLPQYYNNRELSWLDFNYRVLQDAQDKNNPLLEQLNFISIFSSNLDEFFM
VRVAGLQDQVKMGYDKPENKAQLTPKQQLDQIKIKNKDIVDLQYKRYNELIDDLKQYQVE
IIKPEQLPDDLLPQLESEFKSGILPTLTPLGIDAYHPFPKLNNKSLNIFVDIDTEDDINS
AIVQIPSLISRFYSFNKGDKQYIIMIEDIITYFISDLFTGYTVLNTFTFRITRNADLSIH
EDGAEDLLIEIERFLKERKRGTAVRLEVDGRQATHEDIVWIINQLDVHDNDVYFLDGPLD
LTMLSDLVEHLSNKLKYLKYNKYVPQIPQSLGNNNIFDLSLKRDIFFHHPYESFEPIVDF
IREASEDPNTIAIKQTLYRVSKDSPIINSLKNAAENGKQVTVLVELKARFDEENNVHWAR
MLEDAGCHVIYGMTHLKTHSKIALVVKRINQQLTSFIHLGTGNYNDKTANIYTDMGLITT
NADIAEDAINFFNYLSGYSVKPVYNKLIVAPFDIRDVFLARIDNEIKSHRDNGNGKIIMK
MNSLTDKDIILKLFEASCAGVKVQLIIRGICCLKPGVPGISENIEVVSIVGRFLEHSRIY
YFHNNGDDIIYLSSADAMTRNMIKRVEILFPVEDKEIAKRLLDYMNLQLSDNQKGRYQDQ
FGQYHYIKNNLSPLNSQAFLMKEAMNYGQQLKEDNAKPQVMSVNERKGWFSKFRKQFKK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaaatttgggagataaagacttgaatttaccacagtattataataatagagag
ctaagttggttagattttaattatcgcgtattacaagacgcacaggataagaataaccca
ctattagaacaacttaactttatctctatatttagctcgaatttagatgagttctttatg
gttcgcgtagcgggcttacaagatcaagtgaaaatgggatacgataaacctgaaaacaag
gcccaattaacacctaagcaacaacttgaccaaattaagataaagaataaagacattgtt
gatttacaatataaacgttataacgaattaatagatgatttaaaacaatatcaagtagaa
atcataaaaccagaacaactgcctgatgatttattaccacaacttgaatctgaatttaaa
tctgggattttacctactttaacaccgttgggtatcgatgcttatcatccttttccgaaa
ttaaataataagagcttaaatatttttgtggatattgatactgaagatgatattaattct
gctatcgttcaaataccttcacttatatcccgcttttattcatttaataaaggtgataag
caatatatcattatgattgaagacatcattacctacttcatcagtgatttatttacaggc
tataccgtattaaacacatttacatttagaattacacgtaatgctgatttatccattcat
gaagacggtgcagaagatttattaatagagattgagcgtttcttaaaagaacgtaaacgt
ggtacagcagtacgtttggaagtagatggaagacaagcaacacatgaagatattgtatgg
attatcaatcaattagatgttcacgataatgatgtttatttcttagatggaccacttgat
ttgacaatgctttcagatttagttgaacacctatctaacaagctgaaatatttaaaatat
aacaaatacgtaccacaaatacctcaatctttaggtaataataatatttttgacttatct
ttaaaaagagatatcttcttccaccatccatacgaatcatttgaaccgattgttgatttt
atacgagaagcgtcggaagatcctaacaccattgcaatcaaacaaacactttatcgtgtg
agcaaagattcacctattattaacagcttaaaaaatgctgctgaaaatggtaagcaagtc
actgtgcttgttgaattgaaagcacgttttgatgaggaaaacaatgtacattgggcaaga
atgttagaagatgcaggttgtcatgttatttatggtatgacacatttaaaaacacacagt
aaaattgcgctcgttgttaaacgtattaatcaacagttaacctcgtttattcatttaggt
actgggaactataatgataagacagcaaatatatatactgatatgggattaattaccaca
aacgctgatattgcagaagatgcaatcaatttctttaattatttaagtggctattcggta
aaaccagtctacaacaaattgattgtagcaccttttgatattcgagatgtcttcttagca
cgaattgataatgagattaaatcacaccgtgataacggtaatggtaaaatcattatgaaa
atgaattccttaacagataaagatatcattcttaagttgtttgaagcatcttgtgcaggc
gtaaaagtccaattgattattcgtggtatttgttgccttaaaccaggtgttccaggtata
agtgaaaacatagaagtcgttagtatcgttggaagatttcttgaacattcacgaatctat
tatttccacaataacggggatgatatcatatacctttcttctgctgatgcgatgacaaga
aacatgattaaacgcgtagaaattttattccctgtcgaagataaagagattgctaaacgt
ttattagattatatgaacttacaactttcagataaccaaaaaggtcgttaccaagaccaa
tttggccaatatcattacatcaaaaacaatttgtcgccattaaattctcaagcctttcta
atgaaagaagcaatgaattatggacaacaattaaaagaagataatgcaaaaccccaagtt
atgtcagtcaatgaacgcaaaggttggttctctaagtttcgtaaacaatttaaaaagtaa
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