Parasedimentitalea marina: EBB79_15730
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Entry
EBB79_15730 CDS
T05780
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sedi
Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sedi03009
]
EBB79_15730 (rimO)
Enzymes [BR:
sedi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EBB79_15730 (rimO)
Ribosome biogenesis [BR:
sedi03009
]
Prokaryotic type
ribosomal protein modification factors
EBB79_15730 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Thioredoxin_6
TRAM
CLP1_P
DUF6802
Motif
Other DBs
NCBI-ProteinID:
AZV79185
UniProt:
A0A3T0N594
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All DBs
Position
3212259..3213665
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AA seq
468 aa
AA seq
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MTSNPPELRPDLAPKLHIGDAPRAGQPTLGMVSLGCPKALVDSERILTRLRAEGYGISPD
YTGADAVIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVT
GPHQYEQVLDAVHAAVPPDPNPFVDLLPATGVQLTPRHFSYLKISEGCNHRCKFCIIPDM
RGRLTSRPAHAVLREAEKLVAAGVRELLVISQDTSAYGMDRKHDLNPWKGDEVRSHITDL
TRELGKLGSAQDLWVRLHYVYPYPFVRELIPLMADPDTAVLPYLDIPFQHAHPDMLKRMA
RPAAGAKTLDEIAAWRATCPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFKY
ENVAGARSNELPDHVAEELKQERWERFMQKAQAISEAKLEAKVGQVMQVIVDDIDEDGIA
TCRTKADAPEIDGNLFIDEGTEGLSAGDLVTVEVDEAGEYDLWGCISN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaatccgccagagctccgccccgaccttgccccgaaactgcacatcggtgat
gcgccgcgcgcaggccagccgactcttggcatggtatccttgggctgtcccaaggcgctg
gtcgacagtgagcgtatcctgacccggcttcgagccgagggctatggtatctctccggat
tacaccggagccgatgcggtgatcgtcaacacttgcggtttcctcgacagtgccaaggcc
gaaagcctggatgcgatcggcgaggcgctgaaggagaacggcaaggtgatcgttaccggc
tgcttgggggccgagccagattacattcgtgagcaccatccgcgcattctggccgtcacc
ggcccgcatcaatacgaacaggtgctggacgcagtgcatgccgccgtgccgccagatccg
aatccctttgtcgacctgctgcctgccaccggcgtccagctcaccccgcgccatttcagc
tatctgaaaatctcggaaggctgcaatcaccgctgcaagttctgcatcatcccggatatg
cgtggccgtctgacgtcgcgcccggcccacgccgtgctgcgcgaggccgagaaactggtc
gccgccggagtacgtgaactgctggtgatctcgcaggatacctcggcctatggcatggat
cgcaaacacgacctgaacccgtggaagggcgatgaggtccgcagccatatcaccgacctg
acccgtgagctgggcaaactgggctctgcgcaggatctgtgggtgcggctgcattacgtc
tatccctacccgtttgtgcgcgagctgatcccgctgatggccgatcccgacaccgcagtg
ttgccttatctggacatcccgtttcagcatgcacaccccgatatgctgaaacgcatggcg
cgccccgctgctggcgccaaaaccctggacgagattgccgcctggcgcgccacctgcccc
gacatcaccctgcgctcgacctttatcgttggctaccctggggaaaccgaggcagagttc
cagcacttgctggactggatggacgaagcacagctggaccgggttggctgtttcaaatat
gaaaacgtcgcgggtgcgcgctccaacgagttgcccgatcatgtcgccgaagagctgaag
caagagcgttgggaacgcttcatgcaaaaggcgcaggcgatttccgaggccaagctggag
gctaaggtgggtcaggtgatgcaggtgatcgtggatgacatcgacgaagacggcatcgcc
acctgccgcaccaaggccgacgcccccgagattgacggcaacttgtttattgatgaaggc
accgaaggattgtcagctggcgatctggtgaccgtcgaggtggatgaggccggcgagtat
gatttgtggggatgcatttcgaattag
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