Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_010995
Help
Entry
SEEB0189_010995 CDS
T02739
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
seeb
Salmonella enterica subsp. enterica serovar Bareilly
Pathway
seeb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
seeb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SEEB0189_010995
Enzymes [BR:
seeb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SEEB0189_010995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AGQ59043
LinkDB
All DBs
Position
complement(2230242..2232233)
Genome browser
AA seq
663 aa
AA seq
DB search
MVRMMKQIQEQTALNLLHSHWRLADDRNVLYLSPTGETDAEKTVELSPEQAGRIREITAI
TSSLLIKLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEA
NSVIAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNG
NAYEIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRAQERLRILANTD
TVTGLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLAL
LSCLEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGI
SLAPRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALEND
QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQIAKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIEND
TLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTK
KMR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcatgatgaaacagattcaggaacaaacggcgctaaatctccttcactctcac
tggcgtctggctgatgaccgcaacgtgctgtatctctccccgacaggtgaaacggatgca
gaaaaaacggttgagctatcgccggagcaagccgggcgtatccgggaaataacggcgatt
acgtccagtctgctgataaagttgttgatagaaaaacaggttaccgctgtgcacctggta
ggccgtaagattaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcct
gccgtcgcgccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagcc
aactcagtcattgcgatactggatagtcggggaaaaatctgtcgatttaatcggttatgc
gaagagtacacgggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattattt
atgagtcgccgggaggcggttgcctcccggcactacattgagaatttttttcgcaatggc
aatgcctatgaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttattt
cgtaataaatttgtccataacggtagcggaaaaaacgaaattttcctgatctgcgcaggc
acggatatcaccgaagaaaggcgggctcaggagcgtttacgcatactggcgaatacagac
accgtcaccggcctgcccaatcgcaatgctatccatgaatttattaatcatgctattgcc
tcggctggcgagtcgcaagtgggtatcgtttatctcgatctggataacttcaagaaaatt
aatgacgcctatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctg
ttgagttgtctggaggaagatcaattgctggccagactggggggagatgaattcattgtc
ctcgctgcccatacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgt
ctgcggcaaccgtttcgcattggactcattgaagtttacacgggatgcgccattggcatt
tcgttggccccccggcacggacaggacagcgaaagtctcattcgcactgccgacaccgca
atgtataacgccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaat
cagcgcgtatttgactatcactggctggatacaaacctgcgaaaagcgctggaaaacgac
cagttacttattcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaa
gcgctggtacgctggcaatcgccggaacgcggattaattccgccgctggagttcatctca
tacgccgaagagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtagtt
cgccagattgcgaaatggcgcgataaggggattaacttgcgcgtagccgttaacttttcg
gcgcgacaactggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctg
aattttgagtattgcccaatcgatgtcgagctaacggaaagctgcctgatcgaaaacgac
acgctggcgctatcggttatccagcaatttagtcagctcggcgcccagattcatctggat
gattttggcacagggtattcttcgctttctcaactcgcccggttccctattgatgccgtt
aaactggatcaggctttcgtcagagatatccataagcaaccgctgtcgcaatctctggtt
agggcgattgtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggtgtagaa
aatgctaaagaagatgccttcctgacaaaaaacggcgtcaatgaacgacagggcttttta
ttcgccaaacctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaa
aaaatgcgttaa
DBGET
integrated database retrieval system
