Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_25035
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Entry
CFSAN002050_25035 CDS
T02734
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CFSAN002050_25035
Enzymes [BR:
seec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CFSAN002050_25035
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AGQ75896
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All DBs
Position
complement(4847255..4849261)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR
LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV
EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC
SIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDPTQMEAAQQRLTEESDILTAL
DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVL
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD
HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS
HENPDYKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagccgctcgttaacaattaaacagatggcaatggttgcggccgttgtcatg
gtgtttgtttttgtcttttgcaccgttttgttgttccatctggtacagcagaaccgctac
aacacggctacgcaactggaaagtatcgcgcgatctgttcgggaacctctttcttccgcg
attctaaaagcggatctccccggcgcggaaaccattctggaaagtattaaacctgcgggc
gtggtgagtcgcgccgatgtggtattgccgaatcagttccaggcgttgcgtaagcgcttc
attcctgaacgccccgtcccggttatggtgacgcgtctcttcgaactgccggtacaaatt
tctttaccggtttattcgctggagcgtcccgccaatccgcaaccgctggcctaccttgta
ttgcaggcggattcgtaccgtatgtacaagttcgtcatgagcgcgctctctacgttagtg
accatttacttacttctatcgctgatcctgacggtggccatcgcctggtgcgtaaaccgc
ctgattgtgcatccgctgcgcaaaatcgcccgcgagctgaacgacattccgcagcaggag
ctgatcggacatcagctggcgttgccgcgtctgcatcaggatgatgaaattgggatgctg
gtgcgcagctataacctcaaccagcagcttatgcagcgtcaacgcgaggagcaaacggac
aacgcgatgcgttttccggtttccgagctgcccaataaagcctttttaatggcgctgctg
gaacaggttatcacccgccaacagaccaccgcgcttatcatcgtgacgtgcgaaacgttg
cgtgacacggcaggcgtgctgcaagaaacgcagcgggagattctattactgacgctggtt
gagaagctgaagtcggtgctggcgccgcgcatggtgcttacgcaggtcagcgggtatgac
ttcgccattatcgcccacggcgttaaagagccgtggcacgccattacattaggtcagcaa
atactcactatcattaatgaacgactgcccattcagggtattcaactgcgcccaagctgc
agtattggcattgcgatgtattatggcgatctgaccgccgaagagctctatggtcgcgcc
gtctccgccgcgtttaccgcgcgccgaaaaggtaaaaatcagatccagttctttgacccg
acgcagatggaggccgctcaacagcgtcttaccgaagagagcgatatccttaccgcgctg
gataaccatcagtttgccatttggctgcagccgcaggtcgagatgcgcagcggcaacgta
ttaagcgccgaagccttgttacgtatgcaacagccggacggtagctgggaattgccggag
gggctgattgagcgcattgaatcctgcggcctgatggtcacggtgggctattgggtgctg
gaagagtcctgtcgccagcttgccgcctggcaggagcgcggcgtgacattgccgctctcc
gtcaatctttccgcgttacagctcatgcaccctggcatggtgtcggagctgctggaattg
ttaaatcgctatcgtattcaaccaggtacgctgattcttgaggtcactgaaagccgccgt
atcgacgatccgcacgcagccgtcgctatcttacgtccgttacgtaatgctggcgtgcgt
atcgcactggatgattttggcatgggttacgcggggctgcgccagttacagcatatgaag
tcgctaccggtcgatatccttaaaattgataaaatgtttgtcgatgggttaccggatgat
cacagtatggtgacggcgattatcctgatggcccgcagtcttaatttacaattgattgcc
gagggcgtggagaacgaggcgcaacgcgcgtggctggaacaggcgggagtcaacgtcgcg
caaggcttcctgtttgctcggcccgttcccgcggatatctttgaagaacggtatctgtcg
cacgaaaatcctgattacaaaagttaa
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