Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_25520
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Entry
CFSAN002050_25520 CDS
T02734
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Pathway
seec00540
Lipopolysaccharide biosynthesis
seec01100
Metabolic pathways
seec01250
Biosynthesis of nucleotide sugars
Module
seec_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CFSAN002050_25520 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
seec01005
]
CFSAN002050_25520 (rfaD)
Enzymes [BR:
seec01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CFSAN002050_25520 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
seec01005
]
Core region
CFSAN002050_25520 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGQ74880
LinkDB
All DBs
Position
4961696..4962628
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MSGEELGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAAVNLWFLESGKSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRNAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaatatcgttaaagccctgaat
gataaaggtatcaccgatattctggtggtggataacctgaaagacggcaccaagtttgta
aacctggtggatctgaacattgctgactatatggataaggaagatttcctgatccagatt
atgtccggagaagagctcggcgatatcgaagctattttccatgaaggcgcctgctcttcc
accaccgagtgggacggcaagtatatgatggataataactatcaatactccaaagagctc
ctgcactattgtcttgaacgcgaaatcccgttcctctacgcctcttctgccgccacctat
ggcggtcgcacgtctgatttcatcgaatcgcgcgaatacgaaaaaccgcttaacgtttac
ggctattctaaattcctgtttgatgaatatgtgcgccagatcctgccagaagcgaactcg
cagattgtcggtttccgctatttcaacgtctatggaccacgtgaaggccataaaggcagc
atggcaagcgtggcatttcatctgaatacacagttaaacaacggcgaaagcccgaaactg
tttgaaggcagcgaaaacttcaagcgcgacttcgtttatgtgggcgatgtggccgccgtt
aacctgtggttcctggaaagcggcaagtccggcatctttaacctgggcacaggccgtgcg
gaatctttccaggccgtcgccgacgcgacgctggcataccataaaaaaggcagcattgaa
tacattccgttcccggataagctgaaaggccgctatcaggcgtttacgcaagcggattta
accaatctacgcaacgcgggctatgacaaaccctttaagaccgtcgccgaaggcgtcacg
gagtatatggcctggctgaaccgcgacgcgtaa
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