Salmonella enterica subsp. enterica serovar 4,[5],12 i - str. 08-1736: SE451236_02840
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Entry
SE451236_02840 CDS
T02738
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
seen
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736
Brite
KEGG Orthology (KO) [BR:
seen00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SE451236_02840
Enzymes [BR:
seen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SE451236_02840
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
BPD_transp_1
Motif
Other DBs
NCBI-GeneID:
16386059
NCBI-ProteinID:
AGQ87708
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All DBs
Position
604885..606891
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR
LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV
EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC
SIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL
DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVL
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD
HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS
HENPDYKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagccgctcgttaacaattaaacagatggcaatggttgcggccgttgtcatg
atgtttgtttttgtcttttgcaccgttttgttgttccatctggtacagcagaaccgctac
aacacggctacgcaactggaaagcatcgcgcgatctgttcgggaacctctttcttccgcg
attttaaaagcggatctccccggcgcggaaaccattctggaaagtattaaacctgcgggc
gtggtgagtcgcgccgatgtggtattgccgaatcagttccaggcgttgcgtaagcgcttc
attcctgaacgccccgtcccggttatggtgacgcgtctcttcgaactgccggtacaaatt
tctttgccggtttattcgttggagcgtcctgccaatccgcaaccgctggcctaccttgta
ttgcaggcggattcgtaccgtatgtacaagttcgtcatgagcgcgctctctacgttagtg
accatttacttacttttatcgctgatcctgacggtggccatcgcctggtgcgtaaaccgc
ctgattgtgcatccgctgcgcaaaatcgcccgcgagctgaacgacattccgcagcaggag
ctgatcggacatcagctggcgttgccgcgtctgcatcaggatgatgaaattgggatgctg
gtgcgcagctataacctcaaccagcagcttatgcagcgtcaacgcgaggagcaaacggac
aacgcgatgcgttttccggtttccgagctgcccaataaagcctttttaatggcattgctg
gaacaggttatcacccgccaacagaccaccgcgcttatcatcgtgacgtgcgaaacgttg
cgtgacacggcaggcgtgctgcaagaaacgcagcgggagattctattactgacgctggtt
gagaagctgaagtcggtgctggcgccgcgcatggtgcttacgcaggtcagcgggtatgac
tttgccattatcgcccacggcgttaaagagccgtggcacgccatcacattaggtcagcaa
atactcactatcattaatgaacgactgcccatccagggtattcaactgcgcccaagctgc
agtattggcattgcgatgtattatggcgatctgaccgccgaagcgctctatggtcgcgcc
gtctccgccgcgtttaccgcgcgccgaaaaggtaaaaatcagatccagttctttgacccg
gcgcagatggaggccgctcaacagcgccttaccgaagagagcgatatccttaccgcgctg
gataaccatcagtttgccatttggctgcagccgcaggtcgaaatgcgcagcggcaacgta
ttaagcgccgaagccttgttacgtatgcagcagccggacggtagctgggaattaccggag
gggctgattgagcgcattgaatcctgcggcctgatggtcacggtgggctattgggtgctg
gaagagtcctgtcgccagcttgccgcctggcaggagcgcggcgtgacattgccgctctcc
gtcaatctttccgcgttacagctcatgcaccctggcatggtgtcggatctgctggaattg
ttaaaccgctatcgtattcaaccgggtacgctgattcttgaggtcactgaaagccgccgt
atcgacgatccacacgctgccgtcgctatcttacgtccgttacgtaatgctggcgtgcgt
atcgcactggatgattttggcatgggttacgcggggctgcgccagttacagcatatgaag
tcgctaccggtcgatatccttaaaattgataaaatgtttgtcgatgggttaccggatgat
cacagtatggtgacggcgattatcctgatggcccgcagtcttaatttacaattgattgcc
gagggcgtggagaacgaggcgcaacgcgcgtggctggaacaggcgggagtcaacgtcgcg
caaggcttcctgtttgctcggcccgttcccgcggatatctttgaagaacggtatctgtcg
cacgaaaatcctgattacaaaagttaa
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