Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_4030
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Entry
UMN798_4030 CDS
T01782
Symbol
rfaD
Name
(GenBank) ADP-L-Glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Pathway
sef00540
Lipopolysaccharide biosynthesis
sef01100
Metabolic pathways
sef01250
Biosynthesis of nucleotide sugars
Module
sef_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
UMN798_4030 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sef01005
]
UMN798_4030 (rfaD)
Enzymes [BR:
sef01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
UMN798_4030 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sef01005
]
Core region
UMN798_4030 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AFD60569
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Position
3925457..3926389
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MSGEELGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAAVNLWFLESGKSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRNAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaatatcgttaaggccctgaat
gataaaggtatcaccgatattctggtggtggataacctgaaagacggcaccaagtttgta
aacctggtggatctgaacattgctgactatatggataaggaagatttcctgatccagatt
atgtccggagaagagctcggcgatatcgaagctattttccatgaaggcgcctgctcttcc
accaccgagtgggacggcaagtatatgatggataataactatcaatactccaaagagctg
ctgcactattgtcttgagcgcgaaatcccgttcctctacgcctcttctgccgccacctat
ggcggtcgcacgtctgatttcatcgaatcgcgcgaatacgaaaaaccgcttaacgtttat
ggctattctaaattcctgtttgatgaatatgtgcgccagatcctgccagaagcgaactcg
cagattgtcggtttccgctatttcaacgtctatggaccacgtgaaggccataaaggcagc
atggcaagcgtggcatttcatctgaatacacagttaaacaacggcgaaagcccgaaactg
tttgaaggcagcgaaaacttcaagcgcgacttcgtttacgtgggcgatgtggccgccgtt
aacctgtggttcctggaaagcggcaagtccggcatctttaacctgggcacaggccgtgcg
gaatctttccaggccgtcgccgacgcgacgctggcataccataaaaaaggtagcattgaa
tacattccgttcccggataagctgaaaggtcgctatcaggcgtttacgcaggcggattta
accaatctgcgcaacgcgggctacgacaaaccctttaagaccgtcgccgaaggcgtcacg
gagtatatggcctggctgaaccgcgacgcgtaa
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