Salmonella enterica subsp. enterica serovar Heidelberg SL476: SeHA_C1888
Help
Entry
SeHA_C1888 CDS
T00738
Name
(GenBank) cyclic diguanylate phosphodiesterase (EAL) domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
seh
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Pathway
seh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
seh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SeHA_C1888
Enzymes [BR:
seh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SeHA_C1888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ACF70329
UniProt:
A0A6C6ZSL9
LinkDB
All DBs
Position
1844344..1846335
Genome browser
AA seq
663 aa
AA seq
DB search
MVRMMKQIQEQTALNPLHSHWRLADDRNVLYLSPTGETDTEKTVELSPEQAGRIREITAI
TSSLLITLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEA
NSVIAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNG
NAYEIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRAQERLRILANTD
TVTGLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLAL
LSCLEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGI
SLAPRHGQDSDSLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALEND
QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQIARWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIEND
TLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTK
KMR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcatgatgaaacagattcaggaacaaacggcgctaaatccccttcactctcac
tggcgtctggctgatgaccgcaacgtgctgtatctctccccgacaggtgaaacggataca
gaaaaaacggtcgagctatcgccggagcaagccgggcgtatccgggaaataacggcgatt
acgtccagtctgctgataacgttgttgatagaaaaacaggttaccgctgtgcacctggta
ggccgtaagattaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcct
gccgtcgcgccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagcc
aactcagtcattgcgatactggatagtcggggaaaaatctgtcgatttaatcggttatgc
gaagagtacacaggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattattt
atgagtcgccgggaggcggttgcctcccggcactacattgagaatttttttcgcaatggc
aatgcctatgaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttattt
cgtaataaatttgtccataacggtagcggaaaaaacgaaattttcctgatctgcgcaggc
acggatatcaccgaagaaaggcgggctcaggagcgtttacgcatactggcgaatacagac
accgtcaccggcctgcccaatcgcaatgctatccatgaatttattaatcatgctattgcc
tcggctggcgagtcgcaagtgggtatcgtttatctcgatctggataacttcaagaaaatt
aatgacgcctatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctg
ttgagttgtctggaggaagatcaattgctggccagactggggggagatgaattcattgtc
ctcgctgcccatacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgt
ctgcggcaaccgtttcgtattggactcattgaagtttacacgggatgcgccattggcatt
tcgttggccccccggcacggacaggacagcgacagtctcattcgcactgccgacaccgca
atgtataacgccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaat
cagcgcgtatttgactatcactggctggatacaaacctgcgaaaagcgctggaaaacgac
cagttacttattcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaa
gcgctggtacgctggcaatcgccggaacgcggattaattccgccgctggagttcatctca
tatgccgaagagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtggtt
cgccagattgcgagatggcgcgataaggggattaacttgcgcgtagccgttaacttttcg
gcgcgacaactggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctg
aattttgagtattgcccgatcgatgtcgagctaacggaaagctgcctgatcgaaaacgac
acgctggcgctatcggttatccagcaatttagtcagctcggcgcccagattcatctggat
gattttggcaccgggtattcttcgctttctcaactcgcccggttccctattgatgccgtt
aaactggatcaggctttcgtcagagatatccataagcaaccgctgtcgcaatctctggtt
cgggcgattgtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggcgtagaa
aatgctaaagaagatgccttcctgacaaaaaacggcgtcaatgaacgacagggcttttta
ttcgccaaacctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaa
aaaatgcgttaa
DBGET
integrated database retrieval system
